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CAZyme Information: MGYG000001508_00340

You are here: Home > Sequence: MGYG000001508_00340

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Thalassobacillus devorans
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_D; Halobacillaceae; Thalassobacillus; Thalassobacillus devorans
CAZyme ID MGYG000001508_00340
CAZy Family CBM50
CAZyme Description putative peptidoglycan endopeptidase LytE
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
340 35833.48 9.8165
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001508 4066265 Isolate not provided not provided
Gene Location Start: 191110;  End: 192132  Strand: -

Full Sequence      Download help

MKNNLIKKAI  VTTSFVGALT  IGAGVAGAES  VTVQSGDSLW  KFSQQYGVSI  YKIKQLNGLS60
SDIIHPGQTL  QVSESSSTSS  SSSSSSNATT  YTVKSGDTLS  KIGAQFGVNY  RDIMKWNNIS120
SHIIYVGQTL  KLEGTSSSQS  TSTDSSSSNT  SSSSSTYTVK  SGDYLSKIAS  QYGVSYRDIM180
KWNNLNSTII  HVGQKLSING  SSSTPTQTST  SSSSSSTTQT  STSSNTSGLI  STAKQYIGTP240
YVWGGTSPSG  FDCSGYLNYV  FAKNGTNLPR  TVAQIHSVGK  SVNSPSAGDL  VFFETYKAGP300
SHAGIYLGNG  QFIHSGSSGV  TISDMNISYW  KSRYLGAKSY  340

Enzyme Prediction      help

No EC number prediction in MGYG000001508_00340.

CAZyme Signature Domains help

Created with Snap1734516885102119136153170187204221238255272289306323157198CBM50
Family Start End Evalue family coverage
CBM50 157 198 1e-15 0.95

CDD Domains      download full data without filtering help

Created with Snap1734516885102119136153170187204221238255272289306323238338NLPC_P604335PRK13914229338Spr28198PRK0634726199PRK06347
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00877 NLPC_P60 2.21e-38 238 338 1 104
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
PRK13914 PRK13914 1.62e-36 4 335 2 475
invasion associated endopeptidase.
COG0791 Spr 6.86e-31 229 338 78 197
Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].
PRK06347 PRK06347 6.99e-27 28 198 405 591
1,4-beta-N-acetylmuramoylhydrolase.
PRK06347 PRK06347 1.68e-25 26 199 328 524
1,4-beta-N-acetylmuramoylhydrolase.

CAZyme Hits      help

Created with Snap17345168851021191361531701872042212382552722893063237340QGH95830.1|CBM507340QAW03470.1|CBM507340QAS07164.1|CBM507340AOL32718.1|CBM507340QGI20964.1|CBM50
Hit ID E-Value Query Start Query End Hit Start Hit End
QGH95830.1 5.18e-87 7 340 2 334
QAW03470.1 5.18e-87 7 340 2 334
QAS07164.1 5.18e-87 7 340 2 334
AOL32718.1 5.18e-87 7 340 2 334
QGI20964.1 5.18e-87 7 340 2 334

PDB Hits      download full data without filtering help

Created with Snap17345168851021191361531701872042212382552722893063232293387CFL_A1563384XCM_A2273382K1G_A2253306B8C_A2333384FDY_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7CFL_A 5.67e-24 229 338 17 135
ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile]
4XCM_A 3.14e-19 156 338 4 228
Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8]
2K1G_A 9.96e-19 227 338 7 121
SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12]
6B8C_A 1.93e-17 225 330 27 134
Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium]
4FDY_A 4.30e-14 233 338 198 308
ChainA, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50],4FDY_B Chain B, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Created with Snap17345168851021191361531701872042212382552722893063237340sp|P54421|LYTE_BACSU33340sp|O07532|LYTF_BACSU29340sp|O31852|CWLS_BACSU9204sp|Q6GJK9|SLE1_STAAR7204sp|Q49UX4|SLE1_STAS1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P54421 3.33e-86 7 340 2 334
Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1
O07532 7.98e-74 33 340 178 487
Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2
O31852 2.11e-68 29 340 88 413
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1
Q6GJK9 3.92e-39 9 204 8 207
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=sle1 PE=3 SV=1
Q49UX4 6.56e-39 7 204 3 199
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000248 0.999055 0.000193 0.000178 0.000167 0.000142

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001508_00340.