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CAZyme Information: MGYG000002301_00152

You are here: Home > Sequence: MGYG000002301_00152

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus warneri
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus warneri
CAZyme ID MGYG000002301_00152
CAZy Family CBM50
CAZyme Description N-acetylmuramoyl-L-alanine amidase sle1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
273 MGYG000002301_1|CGC3 28675.22 6.4903
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002301 2673052 Isolate China Asia
Gene Location Start: 157274;  End: 158095  Strand: -

Full Sequence      Download help

MKKLAFAVTA  ASGAAAALSH  HDAEASTQHK  VQSGESLWTI  AQKYNTSVDS  IKQNNNLDNN60
MVFPGQVITV  GGSASQSSSS  NTSSQSGSPS  THTVQSGESL  NIIANKYGVS  VNELMSANNL120
NGYLITPNQT  LKIPNGGSGA  GAGAGSGGAT  ATQGNTSTQS  PSFNHQNLYT  EGQCTWYVFD180
RRAQAGKPIS  TYWSDAKYWA  TGAANDGYQV  DHSPEVGAIM  QSVPGPYGHV  AYVERVNGDG240
SILISEMNYT  NGPYNTNYRT  IPASEVSSYA  FIH273

Enzyme Prediction      help

No EC number prediction in MGYG000002301_00152.

CDD Domains      download full data without filtering help

Created with Snap13274054688195109122136150163177191204218232245259154273COG3942169272PRK08581167248CHAP40135LysM92134LysM
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3942 COG3942 6.77e-43 154 273 53 171
Surface antigen [Cell wall/membrane/envelope biogenesis].
PRK08581 PRK08581 1.44e-23 169 272 508 616
amidase domain-containing protein.
pfam05257 CHAP 2.76e-19 167 248 3 83
CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.
COG1388 LysM 8.28e-14 40 135 1 112
LysM repeat [Cell wall/membrane/envelope biogenesis].
pfam01476 LysM 2.76e-13 92 134 1 43
LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.

CAZyme Hits      help

Created with Snap132740546881951091221361501631771912042182322452591273QNQ43918.1|CBM501273AXV43047.1|CBM501273VED76145.1|CBM501273QSF51327.1|CBM501273AXZ24167.1|CBM50
Hit ID E-Value Query Start Query End Hit Start Hit End
QNQ43918.1 9.24e-181 1 273 1 273
AXV43047.1 9.24e-181 1 273 1 273
VED76145.1 9.24e-181 1 273 1 273
QSF51327.1 9.24e-181 1 273 1 273
AXZ24167.1 9.24e-181 1 273 1 273

PDB Hits      download full data without filtering help

Created with Snap132740546881951091221361501631771912042182322452591562732K3A_A1622732LRJ_A1692725T1Q_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2K3A_A 3.47e-40 156 273 39 153
ChainA, CHAP domain protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292]
2LRJ_A 4.85e-38 162 273 3 112
ChainA, Staphyloxanthin biosynthesis protein, putative [Staphylococcus aureus subsp. aureus COL]
5T1Q_A 1.37e-16 169 272 248 356
ChainA, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_B Chain B, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_C Chain C, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_D Chain D, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325]

Swiss-Prot Hits      download full data without filtering help

Created with Snap132740546881951091221361501631771912042182322452591273sp|Q2G0D4|SSAAL_STAA827273sp|Q5HRU2|SLE1_STAEQ27273sp|Q8CMN2|SLE1_STAES2273sp|Q4L3C1|SLE1_STAHJ29273sp|Q7A7E0|SLE1_STAAN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q2G0D4 6.82e-143 1 273 1 265
Probable autolysin SsaALP OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_00671 PE=1 SV=1
Q5HRU2 5.71e-72 27 273 84 324
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1
Q8CMN2 5.71e-72 27 273 84 324
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sle1 PE=3 SV=1
Q4L3C1 1.52e-67 2 273 3 329
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=sle1 PE=3 SV=1
Q7A7E0 2.49e-67 29 273 93 334
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain N315) OX=158879 GN=sle1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000616 0.998419 0.000220 0.000283 0.000233 0.000190

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002301_00152.