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CAZyme Information: MGYG000001018_00230

You are here: Home > Sequence: MGYG000001018_00230

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Mediterraneibacter sp900751785
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter; Mediterraneibacter sp900751785
CAZyme ID MGYG000001018_00230
CAZy Family CBM51
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2264 248978.7 4.0981
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001018 2841260 MAG Sweden Europe
Gene Location Start: 14220;  End: 21014  Strand: +

Full Sequence      Download help

MKKRQRRRGR  KILCGVLAGV  TVSSMAAVPG  LASTDWPDMG  PANALTEDYM  GLHRSVRDSN60
IRPDDILTLD  SDNDLLKRAF  SRSVDYAYDE  LVVGPKQFPL  DEQNEQRISK  HYNGEGYYTS120
TAIPAIWGTY  HGLPGQSYRE  CFCARDVAHT  SEAGALLALN  EENYQMLSRF  AEESADLYWR180
DVFHSEDGGW  STKSANQKWW  TLWSFDFYGD  AYYMDAGFQE  LPAPFEVMDK  IWTQYRWTGD240
ERWIDDTMIN  YGMQLHSYDK  FMKNHDLDGD  GLADNGKNGS  ILPTLYEFEA  SGYLQESDVD300
WEKMDEPTGD  PSYPYESTLV  IKPDFFMNHS  FYELPLTMKL  IGKSGNTDVE  QGENAYIVRI360
RNKEYDAEKP  AVLKTFEQMS  SRNNYADIHD  VEIPVYIPEG  VTFEVYNSAE  KMNEEYYTVS420
DNGDGTKTIT  VKEDFFRHEY  ADNGIYRTNT  GIVVRFSDGS  SGMAIIKLDD  SNVNGDLNVV480
SIKKNGTDVT  DSLEFDPSIN  TTYLDYDAAE  LADTVYTLTI  RHSDPVTPKK  EQAGSLQEYC540
RIASDLTRVT  TAGDTAGTQY  QALLAMAGMI  RARIAAGDTT  FQPFHLEKGV  KVNEGEPITL600
TEEMAQEYED  RAAGIRDIIE  SEWRDESAPQ  IYARAVNKLG  EKDMGWGHEN  SFFMPMKELL660
NPGEDTIKYL  NFIQKNALLE  DQLNEEAITY  LPESFYTHGQ  NVAGWQWTKV  GLDRLDPGKK720
TETEILRTYP  EIALTNISNV  VNLMMGVEPY  AADNEVTTLP  RLTDEVGWVT  VNNIPLGQEG780
REALNNDGRD  SDGNGRPTGY  GKPMVNNSFD  LTHVGTAQST  LTNTGDETIT  WNAEFYGTYD840
KLYKTVDGEV  TELTEGIYHK  DTAPASTYCT  IKVEPGETIT  VGTQKDPNGA  KPNTDGMIYL900
SDQEAAFEDY  PDDKPVQKDQ  TIGGTALYNY  TFTEHYDKGL  GVKPNTTIRY  YLPEGTEAFK960
AVPTITDFVR  GQDPQETAAE  ITFRVYLDGE  LKQTVTLNNE  KPTGDELDIA  IDGQSVLDLV1020
AVSENQNIQE  SAAWLDARIL  VEGQDEIPSD  LPDNKLYLTS  MQAVDESGEV  SADQSTQNAA1080
ALEIDGHAFG  RGIGSNGSSE  VTYELSGLYE  KLDAVIGIQD  GNSGSAVFKV  YLDDSQTPMF1140
EHTADADSGE  EKVSIDLSVD  GKRADRIRIV  TEGDTHSVWG  DMILTIGDDV  DLTDPAIIAK1200
RIASAEDIGL  GQKEYNLPEI  PVKNADDYTI  EIASSSEEAV  LALDGTITLD  DNEHDIAVSF1260
RITEKEGQKR  SAVTREFVIY  APGKDKISLT  KLKWTDSVSE  NAPVTINEDI  KGNILKLDDT1320
EYSRGIGMPA  APASQITYEL  EDGLYKRFTA  TVGAAQNSSV  NDNDLFRVFV  YAVDQNGKRT1380
ELYASPVFVK  GPVDQNNHLN  CDLCKAEIEK  YGLAAQDTVD  VDIPSGYRQL  VIRTERIGDS1440
FWGSCAIADP  YFYLNSPYEG  KEIESFEPVS  VQTVKGVKPV  LPDMVKAIYK  DMDVPRNIRV1500
TWDEIDESLY  QEVGQFTVSG  TVEGSDKRPE  CLVEVKDKII  LTAENASVVT  TIGNAPVMPE1560
TVRVQYNDNS  SGEEKVTWDP  MDESNWAQAG  KFTVMGTVDG  TDIRVGCIVR  VDDPNKVIVA1620
DMEPESETAM  ESVQRGTFRI  NGKDYENSIF  AHADSELIYV  LDGQYTRFTT  TVGIKTEGDN1680
PNVIFRGYGI  DENGEETLLY  DTNPVTRVAD  PSKPPQTTDE  NGYYYVGGNV  SYDVDVDVTG1740
FQKLKLVADV  VGNPNTDHAT  YGTPILYKEG  SEFGKNFHTI  TVTADEGGAI  WPNGRVVVPD1800
GESKEFIITP  NPANPVLPEV  KEMAINEFKL  DETEQTVTDN  RFVLENVDQD  HTISVNFRDA1860
SEVPDVKYNV  QVVNGSGSGE  WAAGSTVSIT  ADAAPEGQVF  DCWVSDDGVE  FADAQAASTT1920
FVMPEKDVTV  TATYKESQVS  KKTLEYFLNS  AKEHLANGDV  DDAVESVQKL  FEEAIAEGEA1980
VMAKEDATRE  EIMNATAKLM  KAIQALDMKA  GDKTDLQMAV  ELADMIDLSK  YVEAGQKEFT2040
DAFAAAKDVL  ADGDAMQADI  DSAWSALVDA  LDNLRLKANK  DALEDLLDEV  SGLDLSQYTE2100
ESAAVFEQAL  MRANEVMADE  TLSVEDQAAV  DEAVQALQSA  KDGLVLKSDD  TGDGDQNTGD2160
GDQNTGDGDQ  NTGDSDQNTG  NGDQNTGDGS  QNNGGSQDTG  NGGKDTGSPA  DGQNGKAPAD2220
GAVQKTESGR  KAVKTGDTAA  AGMLLAVLLI  SGVTAVTVLK  KKRA2264

Enzyme Prediction      help

No EC number prediction in MGYG000001018_00230.

CAZyme Signature Domains help

Created with Snap1132263394525666797929051018113212451358147115841698181119242037215010611181CBM51
Family Start End Evalue family coverage
CBM51 1061 1181 2.3e-17 0.8656716417910447

CDD Domains      download full data without filtering help

Created with Snap1132263394525666797929051018113212451358147115841698181119242037215016211766NPCBM10571185NPCBM16341766NPCBM18681935Flg_new_210581185NPCBM
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08305 NPCBM 3.57e-19 1621 1766 7 135
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
pfam08305 NPCBM 1.96e-15 1057 1185 4 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 2.83e-14 1634 1766 35 144
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
pfam18998 Flg_new_2 4.35e-13 1868 1935 1 71
Divergent InlB B-repeat domain. This family of domains are found in bacterial cell surface proteins. They are often found in tandem array. This domain is closely related to pfam09479.
smart00776 NPCBM 8.99e-13 1058 1185 10 145
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.

CAZyme Hits      help

Created with Snap11322633945256667979290510181132124513581471158416981811192420372150301184QYJ80995.1|CBM51301184QYJ92352.1|CBM51671399QUH30699.1|CBM51301184ABO24155.1|CBM5114612150AQM60758.1|CBM71|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QYJ80995.1 2.05e-142 30 1184 16 1064
QYJ92352.1 1.78e-141 30 1184 16 1064
QUH30699.1 2.42e-139 67 1399 37 1009
ABO24155.1 1.15e-136 30 1184 16 1064
AQM60758.1 3.43e-52 1461 2150 1360 1999

PDB Hits      download full data without filtering help

Created with Snap11322633945256667979290510181132124513581471158416981811192420372150155316057NIT_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7NIT_A 1.68e-06 1553 1605 902 954
ChainA, Beta-galactosidase [Bifidobacterium bifidum],7NIT_B Chain B, Beta-galactosidase [Bifidobacterium bifidum],7NIT_C Chain C, Beta-galactosidase [Bifidobacterium bifidum],7NIT_D Chain D, Beta-galactosidase [Bifidobacterium bifidum],7NIT_E Chain E, Beta-galactosidase [Bifidobacterium bifidum],7NIT_F Chain F, Beta-galactosidase [Bifidobacterium bifidum]

Swiss-Prot Hits      download full data without filtering help

Created with Snap1132263394525666797929051018113212451358147115841698181119242037215014622067sp|E8MGH9|HYBA2_BIFL2
Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 1.84e-11 1462 2067 1298 1868
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002109 0.995971 0.000556 0.000771 0.000313 0.000240

TMHMM  Annotations      download full data without filtering help

start end
12 34
2240 2259