CAZyme Information: MGYG000000069_00543

Basic Information

• Species: Clostridium_A leptum
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Clostridium_A; Clostridium_A leptum
• CAZyme ID: MGYG000000069_00543
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1580		173188.64	4.9696

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000069	3099132	Isolate	United Kingdom	Europe

• Gene Location: Start: 572182; End: 576924 Strand: -

Full Sequence      

MRKIGKIIFSFLFVCCTVIGFYITDQSFGMEASAAGNPPQAPERLKVNLLDKPLGVSKDG
LRFSWSFEDPDANEYQSAYRIVVASSKAQFLQKEYVYDSGWSDASASSGVEPAGLPECLT
DNGLYYWAVQVRDSQGLESELSQPEMLVTSVGDQWTNKNGIWGSSSQKFVFLRNKLSLDK
PVEKVIASVTAASTETTQQYVYQFYVNGQLVGLGPSVKNLSDLYYNTYDITSLLNQGENI
LGAVCYAEDKQGFLCQITAFYEDGTKEVLCNSGSNPSSWQALDANEIYGYQGKSIASYYH
ASPENLNGTKFPYGWNQAEFQGTGWKSALSSGSIEEKNQGELTPYPSGNMTRYQQPAASV
TRLSDGSYVVDLGKEIIGSIRLTVDSPKQQTVTLLYGEERNNDGTVKSKMRTGNVYEEQW
VLKKGEQTLEGIGMKCFRYIQIKNFPAALTAEQITGLTIRQEFDDSQSSFSSSNQMLNEI
YEMTKYTVKTAAQSQYVDSQSRERKTYEGDILVQMMSSFSFLDDYSLARHSLDYVVNNPT
WPAEYQLFAITAAWQEYLYSGDIAFLRDHYDQLKNALYDSSYNSNLGLVHNPGKVVMVDW
PYSQRDSYEVSNTAYNTAFNAVCSAAYRDMGNIAAALGYGDDASFLKERSDVIKQNMISR
LYDQNTGRFYDGLTEAGAVVNHCAQHATAFSLACGIYADQAMADRMSATIVADGTIRMSV
YGSYFLLDGLYQSGSGTLARQFMSNPDTQYSSNSWAYMLKKLGATMSTEAWSPEAKGNMT
FSHAWGSSPASQIVRGMFGIKPTAPGFSQFEVKVQPGGLTEGAVEIPTVKGTIPVSFRLA
QDGVITARVSVPANTQAQVLLPANADGSRSVTVNGTDTQAEVQQNFVKVSLGSGTYELVY
DTGTAPDPSEITIPPVVNAEAYVGGLYFWQEPVTMDGVTCGTEGRGLPLNGLRFTLSGNG
ISGGISSSVNLIKNGWQGWKEAGELNGNAGNGQAVQAVRLKLTGEAAQQYDLYYRVHSKT
YGWLDWAKNGQIAGTIGLDKQMEAIQIRIVKKDGGAPGSTTRPFVQKSQDVLTYQTHVQS
YGWQNDVGQGKISGTVGQAKRLEAIRINVHSTEGSIRYRTHVQTYGWQDWAYDGEESGTV
GQAKRLEAIQIELTGGLAEKYDVYYRVHSQTYGWLGWVKNGEPAGTEGLAKRLEGIQITL
VEKGGSAPGMYGGGFIKPGLGTKDGVNYKTHIESYGWQSWRSNGESSGTMGEAKRLEGIC
IQVQNPGAAGDIEYQTHVQTYGWQNWVKNGAVSGTQGQAKRLEAIKIRLTGALAEKYDVY
YRVHAQTYGWLDWAKNGEAAGTEGLAKRLEAIEIRLVEKGGSAPGSTERPYVTPPPATVD
GINYQTHVQIYGWQAWKANGAVSGTSGEAKRLESIRILLQNPGYSGSVEYQTHVQTYGWQ
NWVKDGAESGTSGQAKRLEGIKIRLTGELAEHYDIYYRVHVQTYGWQDWVKNGEMAGTSG
EAKRLEAIEIKLVEKPKPVPPEVSESQAPSENVSTDPALESSSETESLASQSSNSVEAEI
ENGSLSQSQSSVESSKFTDD

Enzyme Prediction     

No EC number prediction in MGYG000000069_00543.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	360	860	2.1e-104	0.996031746031746
CBM67	161	333	2.3e-21	0.9034090909090909

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	2.60e-25	474	790	10	333	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG5492	YjdB	2.44e-23	1219	1465	19	306	Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492	YjdB	2.66e-21	1378	1516	22	161	Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492	YjdB	1.61e-19	1070	1309	24	306	Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam07538	ChW	2.00e-18	1277	1311	1	35	Clostridial hydrophobic W. A novel extracellular macromolecular system has been proposed based on the proteins containing ChW repeats. ChW stands for Clostridial hydrophobic with conserved W (tryptophan). This repeat was originally described in Clostridium acetobutylicum but is also found in other Gram-positive bacteria including Enterococcus faecalis, Streptococcus agalactiae and Streptomyces coelicolor.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AQW20897.1	2.87e-203	46	898	35	871
AFS01190.1	2.39e-182	42	902	11	907
QUX04741.1	3.49e-181	42	902	11	907
APR07480.1	4.87e-181	42	900	11	905
AEB74357.1	7.08e-180	42	902	11	907

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6I60_A	5.60e-33	32	896	22	937	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
6GSZ_A	2.84e-23	54	862	16	847	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
3W5M_A	4.48e-23	189	905	316	1035	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
2OKX_A	1.72e-16	365	867	436	947	Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KM26	1.66e-54	365	861	604	1136	Bifunctional sulfatase/alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22250 PE=1 SV=2
T2KPL4	2.25e-29	43	901	33	950	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
Q82PP4	3.19e-22	189	896	316	1026	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KNB2	1.35e-18	53	897	47	919	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.841786	0.128871	0.027856	0.000297	0.000222	0.000975

TMHMM  Annotations     

start	end
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