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CAZyme Information: MGYG000000358_00505

You are here: Home > Sequence: MGYG000000358_00505

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1436 sp002329395
Lineage Bacteria; Elusimicrobiota; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; UBA1436; UBA1436 sp002329395
CAZyme ID MGYG000000358_00505
CAZy Family CE11
CAZyme Description UDP-3-O-acyl-N-acetylglucosamine deacetylase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
274 29974.38 6.7683
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000358 1561461 MAG Sweden Europe
Gene Location Start: 6169;  End: 6993  Strand: -

Full Sequence      Download help

MRKTLASPAV  VSGIGLHTGV  PATMTFKPAD  NGITFLRTDI  KDAKPIQARL  DNVGSTLRGT60
NLKNETAEVW  TVEHALSALH  ALGITDAAVE  MDGPEPPVTD  GASDQYVDAL  QKAGLTELDA120
EQPLLNIKQK  ITYSCGSISY  SAEPADKLTF  TFLFLHKHPL  VSRQEFTLEF  TPENYIKEIA180
RARTFGFEEE  LAFLKAHGLA  KGGNLENAVI  VGKDKFLNEL  RYRDELVRHK  ILDLVGDISL240
TGRKLPPLKI  TCACGGHKHN  VIFAKILLAN  SEDK274

Enzyme Prediction      help

No EC number prediction in MGYG000000358_00505.

CAZyme Signature Domains help

Created with Snap132741546882951091231371501641781912052192322462603268CE11
Family Start End Evalue family coverage
CE11 3 268 1.3e-85 0.988929889298893

CDD Domains      download full data without filtering help

Created with Snap132741546882951091231371501641781912052192322462602269LpxC1272lpxC1272LpxC1267PRK131884269PRK13187
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam03331 LpxC 1.03e-121 2 269 1 271
UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A.
PRK13186 lpxC 1.17e-112 1 272 3 277
UDP-3-O-acyl-N-acetylglucosamine deacetylase.
COG0774 LpxC 8.05e-95 1 272 3 280
UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell wall/membrane/envelope biogenesis].
PRK13188 PRK13188 6.17e-85 1 267 4 298
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
PRK13187 PRK13187 8.19e-26 4 269 13 292
UDP-3-O-acyl N-acetylglycosamine deacetylase.

CAZyme Hits      help

Created with Snap132741546882951091231371501641781912052192322462602268ACC97643.1|CE112267AVQ26965.1|CE112267SQJ09694.1|CE112267AYF45914.1|CE112267BBA50466.1|CE11
Hit ID E-Value Query Start Query End Hit Start Hit End
ACC97643.1 1.02e-106 2 268 3 270
AVQ26965.1 2.24e-64 2 267 3 271
SQJ09694.1 2.24e-64 2 267 3 271
AYF45914.1 3.98e-64 2 267 4 273
BBA50466.1 5.07e-63 2 267 3 271

PDB Hits      download full data without filtering help

Created with Snap1327415468829510912313715016417819120521923224626022455U39_A22454J3D_A22455U3B_A22457K99_A22456MO4_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5U39_A 1.24e-55 2 245 6 255
Pseudomonasaeruginosa LpxC in complex with CHIR-090 [Pseudomonas aeruginosa PAO1]
4J3D_A 1.31e-55 2 245 4 253
Pseudomonasaeruginosa LpxC in complex with a hydroxamate inhibitor [Pseudomonas aeruginosa PAO1],4J3D_B Pseudomonas aeruginosa LpxC in complex with a hydroxamate inhibitor [Pseudomonas aeruginosa PAO1]
5U3B_A 1.38e-55 2 245 4 253
Pseudomonasaeruginosa LpxC in complex with NVS-LPXC-01 [Pseudomonas aeruginosa PAO1],5U3B_B Pseudomonas aeruginosa LpxC in complex with NVS-LPXC-01 [Pseudomonas aeruginosa PAO1],6MAE_A CHAIN A. UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase PA-LPXC Complexed with (R)-3-((S)-3-(4-(cyclopropylethynyl)phenyl)-2-oxooxazolidin-5-yl)-N-hydroxy-2-methyl-2-(methylsulfonyl)propenamide [Pseudomonas aeruginosa PAO1]
7K99_A 1.54e-55 2 245 4 253
CrystalStructure of P. aeruginosa LpxC with N-Hydroxyformamide inhibitor 19 [Pseudomonas aeruginosa PAO1],7K99_C Crystal Structure of P. aeruginosa LpxC with N-Hydroxyformamide inhibitor 19 [Pseudomonas aeruginosa PAO1],7K9A_A Crystal Structure of P. aeruginosa LpxC with N-Hydroxyformamide inhibitor [Pseudomonas aeruginosa PAO1],7K9A_C Crystal Structure of P. aeruginosa LpxC with N-Hydroxyformamide inhibitor [Pseudomonas aeruginosa PAO1]
6MO4_A 1.54e-55 2 245 8 257
Co-Crystalstructure of P. aeruginosa LpxC-50067 complex [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap132741546882951091231371501641781912052192322462602245sp|B5EFL8|LPXC_CITBB2245sp|C6E4T9|LPXC_GEOSM2267sp|B9L6E8|LPXC_NAUPA2245sp|Q4K6J9|LPXC_PSEF52245sp|B3PCL2|LPXC_CELJU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
B5EFL8 8.08e-59 2 245 4 251
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Citrifermentans bemidjiense (strain ATCC BAA-1014 / DSM 16622 / JCM 12645 / Bem) OX=404380 GN=lpxC PE=3 SV=1
C6E4T9 3.21e-58 2 245 4 251
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Geobacter sp. (strain M21) OX=443144 GN=lpxC PE=3 SV=1
B9L6E8 1.98e-56 2 267 3 269
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) OX=598659 GN=lpxC PE=3 SV=1
Q4K6J9 2.69e-56 2 245 4 253
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=lpxC PE=3 SV=1
B3PCL2 3.80e-56 2 245 4 253
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=lpxC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.942297 0.057210 0.000254 0.000102 0.000056 0.000104

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000358_00505.