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CAZyme Information: MGYG000001838_00029

You are here: Home > Sequence: MGYG000001838_00029

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Zag1 sp000438175
Lineage Bacteria; Cyanobacteria; Vampirovibrionia; Gastranaerophilales; Gastranaerophilaceae; Zag1; Zag1 sp000438175
CAZyme ID MGYG000001838_00029
CAZy Family CE11
CAZyme Description UDP-3-O-acyl-N-acetylglucosamine deacetylase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
272 30527.35 7.677
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001838 2186237 MAG Denmark Europe
Gene Location Start: 22082;  End: 22900  Strand: +

Full Sequence      Download help

MTTILKETSI  SGNGLMKNKP  CTVNFFPSKT  GKIRYFVNGA  EPFEASVDNV  LATDHCVVLG60
NKKAKAMLTE  HLTAALAFCG  IDSIDICMDE  TEVPALDGSS  KKWVELFEKA  GVEKHLFEKP120
KRFTVSEPVY  YLNGKTSLVI  LPSDELYISY  AVNYDHPDLA  RRWVAYNPKN  KQEIIEARTF180
GFYKDLRKFQ  MLGFAQGVTI  ENTLGLKDDG  YTSELRSENE  PVKHKILDLI  GDLYLTGVNP240
LNLKCQILVK  EAGHAVHIKT  AKMLKDKLIE  CK272

Enzyme Prediction      help

No EC number prediction in MGYG000001838_00029.

CAZyme Signature Domains help

Created with Snap132740546881951081221361491631761902042172312442582264CE11
Family Start End Evalue family coverage
CE11 2 264 7.9e-68 0.985239852398524

CDD Domains      download full data without filtering help

Created with Snap132740546881951081221361491631761902042172312442582266LpxC2264lpxC2267LpxC2267lpxC3265PRK13188
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam03331 LpxC 1.04e-76 2 266 2 271
UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A.
PRK13186 lpxC 1.40e-73 2 264 5 272
UDP-3-O-acyl-N-acetylglucosamine deacetylase.
COG0774 LpxC 2.60e-68 2 267 5 279
UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell wall/membrane/envelope biogenesis].
TIGR00325 lpxC 6.14e-48 2 267 4 274
UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK13188 PRK13188 1.98e-47 3 265 7 299
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed

CAZyme Hits      help

Created with Snap132740546881951081221361491631761902042172312442581272AOR38878.1|CE111265BBH38876.1|CE111265BAG03744.1|CE113269AGB42301.1|CE111265BCU10606.1|CE11
Hit ID E-Value Query Start Query End Hit Start Hit End
AOR38878.1 6.72e-171 1 272 36 310
BBH38876.1 3.60e-43 1 265 2 269
BAG03744.1 3.60e-43 1 265 2 269
AGB42301.1 4.11e-43 3 269 7 275
BCU10606.1 1.01e-42 1 265 2 269

PDB Hits      download full data without filtering help

Created with Snap1327405468819510812213614916317619020421723124425832672GO3_A32671P42_A32672IER_A32672JT2_A32673P3C_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2GO3_A 2.56e-30 3 267 6 266
ChainA, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],2GO3_B Chain B, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],2GO4_A Chain A, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],2GO4_B Chain B, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus]
1P42_A 2.73e-30 3 267 5 265
ChainA, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],1P42_B Chain B, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],1YH8_A Chain A, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],1YH8_B Chain B, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],1YHC_A Chain A, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],1YHC_B Chain B, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus]
2IER_A 2.79e-30 3 267 6 266
ChainA, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],2IER_B Chain B, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],2IES_A Chain A, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],2IES_B Chain B, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],2J65_A Structure of LpxC from Aquifex aeolicus in complex with UDP [Aquifex aeolicus VF5],2J65_B Structure of LpxC from Aquifex aeolicus in complex with UDP [Aquifex aeolicus VF5],2O3Z_A Chain A, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],2O3Z_B Chain B, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],3P76_A X-ray crystal structure of Aquifex aeolicus LpxC complexed SCH1379777 [Aquifex aeolicus],4U3B_A LpxC from A.Aaeolicus in complex with the MMP inhibitor 4-[[4-(4-chlorophenoxy)phenyl]sulfanylmethyl]tetrahydropyran-4-carbohydroxamic acid - compound 2 [Aquifex aeolicus VF5],4U3D_A LpxC from A.Aaeolicus in complex with 4-[[4-[2-[4-(morpholinomethyl)phenyl]ethynyl]phenoxy]methyl]tetrahydropyran-4-carbohydroxamic acid (compound 9) [Aquifex aeolicus VF5]
2JT2_A 2.98e-30 3 267 6 266
ChainA, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Aquifex aeolicus],5DRO_A Structure of the Aquifex aeolicus LpxC/LPC-011 Complex [Aquifex aeolicus VF5],5DRO_B Structure of the Aquifex aeolicus LpxC/LPC-011 Complex [Aquifex aeolicus VF5],5DRP_A Structure of the AaLpxC/LPC-023 Complex [Aquifex aeolicus VF5],5DRP_B Structure of the AaLpxC/LPC-023 Complex [Aquifex aeolicus VF5]
3P3C_A 2.98e-30 3 267 5 265
CrystalStructure of the Aquifex aeolicus LpxC/LPC-009 complex [Aquifex aeolicus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap132740546881951081221361491631761902042172312442584268sp|Q04T70|LPXC_LEPBJ4268sp|Q051J2|LPXC_LEPBL10268sp|Q8F3U4|LPXC_LEPIN10268sp|Q72RV5|LPXC_LEPIC3268sp|B0S9V0|LPXC_LEPBA
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q04T70 4.46e-43 4 268 10 278
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) OX=355277 GN=lpxC PE=3 SV=1
Q051J2 4.46e-43 4 268 10 278
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) OX=355276 GN=lpxC PE=3 SV=1
Q8F3U4 1.75e-42 10 268 16 278
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) OX=189518 GN=lpxC PE=3 SV=1
Q72RV5 1.75e-42 10 268 16 278
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=lpxC PE=3 SV=2
B0S9V0 1.39e-41 3 268 9 279
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=lpxC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000075 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001838_00029.