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CAZyme Information: MGYG000000054_00068

You are here: Home > Sequence: MGYG000000054_00068

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides acidifaciens
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides acidifaciens
CAZyme ID MGYG000000054_00068
CAZy Family CE8
CAZyme Description Pectinesterase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
321 MGYG000000054_1|CGC2 36464.22 7.627
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000054 5213730 Isolate United Kingdom Europe
Gene Location Start: 90795;  End: 91760  Strand: -

Full Sequence      Download help

MKRVFFKGMM  LLLLFGATSV  YSQQQQRKDT  LVVTRDGTGD  YRNIQEAVEA  VRAFMDYTVI60
IYIKNGTYKE  KLVIPSWVKN  VQLVGEDAEK  TIITYDDHAN  INKMGTFRTY  TVKVEGNDIT120
FRDLTIENNA  APLGQAVALH  TEGDRLMFVN  CRFLGNQDTV  YTGSEGDCLL  FTNCYIEGTT180
DFIFGPSTAL  FEYCELHSKR  DSYITAASTP  QNEEFGYVFK  NCKLTAAPGV  KKVYLGRPWR240
PYAATVFINC  EFGGHIRPEG  WHNWKNPENE  KTARYAESGN  TGEGAGTSGR  VTWGKQLTKK300
EALRYTPENI  FKESSNWYPY  K321

Enzyme Prediction      help

No EC number prediction in MGYG000000054_00068.

CAZyme Signature Domains help

Created with Snap16324864809611212814416017619220822424025627228830431312CE8
Family Start End Evalue family coverage
CE8 31 312 3.2e-105 0.9895833333333334

CDD Domains      download full data without filtering help

Created with Snap16324864809611212814416017619220822424025627228830432309Pectinesterase25305PLN0277331302PLN0243240312PemB30302PLN02682
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01095 Pectinesterase 2.95e-83 32 309 3 293
Pectinesterase.
PLN02773 PLN02773 2.74e-80 25 305 1 290
pectinesterase
PLN02432 PLN02432 2.26e-73 31 302 13 277
putative pectinesterase
COG4677 PemB 3.28e-67 40 312 93 403
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02682 PLN02682 2.06e-66 30 302 70 352
pectinesterase family protein

CAZyme Hits      help

Created with Snap1632486480961121281441601761922082242402562722883041321QRM98534.1|CE81321ANU56517.1|CE81321QUT78082.1|CE81321CBK68199.1|CE81321QDM11668.1|CE8
Hit ID E-Value Query Start Query End Hit Start Hit End
QRM98534.1 7.35e-207 1 321 1 323
ANU56517.1 1.48e-206 1 321 1 323
QUT78082.1 1.48e-206 1 321 1 323
CBK68199.1 1.48e-206 1 321 1 323
QDM11668.1 1.48e-206 1 321 1 323

PDB Hits      download full data without filtering help

Created with Snap163248648096112128144160176192208224240256272288304322931XG2_A313071GQ8_A312905C1E_A312905C1C_A413191QJV_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 4.20e-40 32 293 6 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
1GQ8_A 2.37e-39 31 307 9 298
Pectinmethylesterase from Carrot [Daucus carota]
5C1E_A 1.59e-27 31 290 11 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 8.22e-27 31 290 11 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1QJV_A 1.18e-20 41 319 18 339
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Created with Snap16324864809611212814416017619220822424025627228830433302sp|Q9LVQ0|PME31_ARATH28317sp|P41510|PME_BRANA28317sp|Q9LXD9|PME51_ARATH28317sp|O49298|PME6_ARATH14321sp|Q8GX86|PME21_ARATH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 8.47e-49 33 302 9 287
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
P41510 4.28e-46 28 317 270 572
Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus OX=3708 GN=BP19 PE=2 SV=1
Q9LXD9 1.01e-45 28 317 238 546
Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana OX=3702 GN=PME51 PE=2 SV=1
O49298 2.82e-45 28 317 248 542
Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana OX=3702 GN=PME6 PE=2 SV=1
Q8GX86 1.07e-44 14 321 242 557
Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana OX=3702 GN=PME21 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000639 0.998192 0.000539 0.000219 0.000194 0.000185

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000054_00068.