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CAZyme Information: MGYG000000124_00125
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Citrobacter youngae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter youngae | |||||||||||
| CAZyme ID | MGYG000000124_00125 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | Putative acyl-CoA thioester hydrolase YbhC | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 116861; End: 118174 Strand: - | |||||||||||
Full Sequence Download help
| MDNFQSPEQP VNISSVSRLA LAMAFGVTLT ACSSTPPDQI PSDQTAPGTS MRPILSANEA | 60 |
| KNFVAAHYFS ALTPNSAPWS PSSITLPAQP DFVVGPAGTQ GVTHTSIQAA VDAAIIKRTN | 120 |
| KRQYIAIMPG EYQGTVYIPA ATGSLTLYGM GEKPLDVKIG QAIDGEMSTA DWRRTVNPGG | 180 |
| KYMPGKPAWY MFDNCQNKRG TNIGVLCSAV VWSQNNGLQL QNLTIENNLG DSVDAGNHPA | 240 |
| VALRTDGDKV QINNVNILGR QNTFFVTNSG VQNRLENDRQ PRTLVTNSYI EGDVDIVSGR | 300 |
| GAVVFDNTDF RVVNSRTQQE AYVFAPATLS NIYYGFLATN SRFTAAGDGV AQLGRSLDVD | 360 |
| ANTNGQVVIR DSVINEGFNM AKPWADSVIA KRPFAGNTGA EDDKGEIQRN LNDTNFNRMW | 420 |
| EYNNRGIGSK VVAEPKQ | 437 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 0.0 | 12 | 431 | 2 | 405 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| PRK10531 | PRK10531 | 0.0 | 12 | 430 | 2 | 422 | putative acyl-CoA thioester hydrolase. |
| pfam01095 | Pectinesterase | 2.40e-10 | 91 | 354 | 1 | 210 | Pectinesterase. |
| PLN02708 | PLN02708 | 5.76e-09 | 79 | 316 | 216 | 413 | Probable pectinesterase/pectinesterase inhibitor |
| PLN02170 | PLN02170 | 3.79e-08 | 89 | 399 | 224 | 476 | probable pectinesterase/pectinesterase inhibitor |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| VEI42721.1 | 1.62e-316 | 1 | 437 | 1 | 437 |
| BBV41801.1 | 9.50e-316 | 1 | 437 | 1 | 437 |
| VDZ57312.1 | 9.50e-316 | 1 | 437 | 1 | 437 |
| BBW40138.1 | 9.50e-316 | 1 | 437 | 1 | 437 |
| BBV46716.1 | 9.50e-316 | 1 | 437 | 1 | 437 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3GRH_A | 6.65e-254 | 39 | 437 | 24 | 422 | Crystalstructure of escherichia coli ybhc [Escherichia coli K-12] |
| 4PMH_A | 5.29e-64 | 43 | 429 | 1 | 366 | Thestructure of rice weevil pectin methyl esterase [Sitophilus oryzae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P46130 | 4.70e-271 | 11 | 437 | 1 | 427 | Putative acyl-CoA thioester hydrolase YbhC OS=Escherichia coli (strain K12) OX=83333 GN=ybhC PE=1 SV=2 |
| Q47474 | 5.04e-117 | 11 | 423 | 1 | 426 | Pectinesterase B OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemB PE=1 SV=2 |
| P55743 | 3.10e-107 | 45 | 424 | 5 | 396 | Pectinesterase B OS=Pectobacterium parmentieri OX=1905730 GN=pemB PE=3 SV=2 |
| E7CIP7 | 3.18e-63 | 42 | 429 | 16 | 382 | Pectinesterase OS=Sitophilus oryzae OX=7048 GN=CE8-1 PE=1 SV=1 |
| P58601 | 5.98e-30 | 49 | 429 | 30 | 394 | Pectinesterase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=pme PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000083 | 0.001925 | 0.998027 | 0.000014 | 0.000003 | 0.000001 |