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CAZyme Information: MGYG000000562_00359

You are here: Home > Sequence: MGYG000000562_00359

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnospira sp000437735
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp000437735
CAZyme ID MGYG000000562_00359
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2119 MGYG000000562_2|CGC1 226570.43 4.343
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000562 2986625 MAG China Asia
Gene Location Start: 3115;  End: 9474  Strand: +

Full Sequence      Download help

MNQKTQNRAQ  RRRANRHHVK  RATAFALAGL  MATSGISLPA  GTFAYGAENN  TLLAFAGAEG60
GGRFATGGRG  YDVYVVTTLE  DYGKGETPVE  GSLRYGIEEF  AKDKGGTMIV  FNVGGTIELK120
QTLTFKERKN  ITVAGQTAPG  DGITLSGWDT  NISNSENLII  RYMRFRPGAA  NVHTGGDSMD180
ALWGRDNKTF  MIDHCSFSWN  TDETVSTYRG  QDGTVQWCIV  SESLTVSGHS  KGRHGYGGIF240
GGDNVLFQNN  LIANHTSRNP  RIGGGCMGDP  TKDGGSTATL  QLSNNVLYNW  GYNTCYGGGY300
AYTNFINNFL  KPGQGTREQV  RYQVIDMGEA  TKPGGFYVNG  NYMDGNAEIT  ADNAKGSKMS360
GVTEGANKTV  VSETPYTAEG  FDSATVTSAT  DCYEPVLAQA  GATYPYRDAI  DARVVAETRT420
DSGRYVNTED  EVGGYPAKES  VRAASFDTDM  DGIPDTWETA  HGLNPNDASD  SKKINSATGY480
AYVEEYFNGL  VENVEQSGYT  APNPDITLDL  QDNAQYDEGQ  TVTVTADVKA  NNGGSIAKVE540
FYNGIQLVGT  ADTAPFTFDY  TGLTDGTYNI  TARAYDNDGN  QTQSSVSKLH  INSTAGTGEW600
TSTDIGNPGV  AGNASLENGV  MTVKGAGKLG  ASEGCVSGST  YADATTDDFQ  YTYQLVKGDA660
EIITKLDSAT  TVDNHVFTGV  MFRESLESGS  KTAALGMSMV  KISNETTWST  YLASRLETNG720
KISDISETID  SPASAEKAGI  PLVRDLHFKS  GADFNGTWFK  LIRRGDTFTG  YASDDGVTWT780
KVGSKTIEMA  QDIYVGFAVD  ANKAANSLEN  LSTAKFSNIA  IHEEFTDVDY  NLEHITTSGA840
DYAAVGTDFT  TQLTADSGYH  LPDAIEIKAG  ENVLAKQDYT  YDAKTGDIVV  KADRLTSGVK900
LTISAQAEED  VKIDYTLQTY  GDTEDVTVTQ  DAGSMTISQT  AESASMVGNK  GTAGKNVSYI960
LFPQSKEAAK  MTLKLKVNSF  SNGKYSGVYA  GAFQPDGDYL  YNSIGFRGTG  DVNAVSPYWL1020
KASGKAGNGS  PKQAWTEGAV  YTVSIEKKAD  NTYYATFQEE  GSAAVNEKTF  KASDSALTPD1080
IMAQFGLAVY  SADVTVTDMV  LSDMSGNVLY  DQNRDNSGQE  ESGYKPQVSG  SDLLTVTGAG1140
SVMKAEQSAE  SGSITQSTGD  AGVNTSYILL  PENDAFASMS  MTLKITDYSI  TGQNAKRTGV1200
FVGAFQTSGK  YAFASLGFRG  YDSSVGTDAL  SGYWMKGTGK  AGNGSPKYEV  AADNKYNVTF1260
TRTENGYLAE  FESLGKPLLV  DANGNKTYSD  KKEFKWKDMT  LTAEDAVSYG  LALVGADVEI1320
TNWVAKDAEG  NILYNQKDYY  KDAGTAPAVT  GVSTPVISED  RSSITVSWSG  EGAQLDGKYR1380
VEVSQDNGVT  YKELDTTAET  SYSYVPENSG  DYQFRITGVC  GGQESNSMET  SSVHFVLPMT1440
APSIGAESGN  AANTVTWSAV  PEAVSYRIYR  STQRAEGYTE  IGTSESTTFT  DTTAENEVPY1500
FYTVAAVGQD  NESNPSAPVS  IMATAGHTGE  YQFGSQAAQM  TVLEKSNDTV  TENEAALKFA1560
YDEAGKVSVY  AGDRLLSEKE  TAAGEAVDIT  IPLQDGRNAV  KVVFENTQGI  KTYRNFNFVK1620
LSSYDMVVDA  SGIRTLDSES  VPVYTTVAEA  LAAVPADNQE  QKVIFVKNGT  YYEKLSITSP1680
YITLIGEDSE  KTVLCYDAAS  GKTDPVTGAA  YGTSGSASVS  IEAAAHHTYM  ENLTVANTFD1740
YPNETIEGKQ  AVAMLTRADQ  LIFNNVRLTG  WQDTLQADGG  GRQYFKNCYI  EGNVDWIFGS1800
AQAVFDDCDI  VANAAGYVTA  ASTESTKTTG  YVFINSRLLK  KSDSVAENSV  ALGRPWRSNA1860
CVTYVKCFMD  SHIKTKGYDN  MSGNTHSAAR  FYEYQSYGPG  FAVNTDRRQL  AKAEGESLTV1920
NGVFAREAGE  GMAFAEGWDA  VAAYAAASAD  YTESGAVSVD  FSELDRAIQN  AEGLNSADYK1980
DFSTVESALN  AAKALDRTTA  TQEEVSVLAH  RLIEAVANLE  TMTPAPEPTP  DPTPTPEPTP2040
TPTPTPSEPD  NNQPGDTGEA  DGSQNGNDNP  SENAAENQQE  SVQTADKTHS  VWYLFGAAVS2100
AMLAGFAGSK  RKKKSDEEL2119

Enzyme Prediction      help

No EC number prediction in MGYG000000562_00359.

CAZyme Signature Domains help

Created with Snap105211317423529635741847953105911651271137714831589169518011907201316431922CE8114309PL1
Family Start End Evalue family coverage
CE8 1643 1922 7.1e-84 0.9479166666666666
PL1 114 309 3.5e-65 0.9890710382513661

CDD Domains      download full data without filtering help

Created with Snap105211317423529635741847953105911651271137714831589169518011907201316441924PemB16441918PLN0277316441900PLN0268216441908Pectinesterase16441914PLN02665
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 5.74e-50 1644 1924 94 402
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02773 PLN02773 2.72e-48 1644 1918 17 290
pectinesterase
PLN02682 PLN02682 5.75e-42 1644 1900 82 334
pectinesterase family protein
pfam01095 Pectinesterase 6.52e-42 1644 1908 12 271
Pectinesterase.
PLN02665 PLN02665 2.50e-38 1644 1914 80 344
pectinesterase family protein

CAZyme Hits      help

Created with Snap105211317423529635741847953105911651271137714831589169518011907201320821QYR21100.1|PL1_251828AWV33235.1|PL1_251828AIQ73887.1|PL1_2481920AOZ92378.1|CE8|PL1_247829QNF31079.1|PL1_2
Hit ID E-Value Query Start Query End Hit Start Hit End
QYR21100.1 2.39e-254 20 821 9 832
AWV33235.1 7.99e-246 51 828 52 846
AIQ73887.1 9.62e-245 51 828 46 840
AOZ92378.1 1.66e-229 48 1920 343 2132
QNF31079.1 2.03e-196 47 829 23 756

PDB Hits      download full data without filtering help

Created with Snap1052113174235296357418479531059116512711377148315891695180119072013164419243UW0_A162219192NSP_A162219191QJV_A162219192NTB_A163119005C1E_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3UW0_A 1.30e-47 1644 1924 44 358
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
2NSP_A 4.48e-45 1622 1919 2 329
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
1QJV_A 4.86e-40 1622 1919 2 329
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]
2NTB_A 1.64e-39 1622 1919 2 329
Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]
5C1E_A 1.10e-32 1631 1900 8 265
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]

Swiss-Prot Hits      download full data without filtering help

Created with Snap105211317423529635741847953105911651271137714831589169518011907201348491sp|Q5B297|PLYC_EMENI50491sp|Q0CLG7|PLYC_ASPTN50491sp|B8NQQ7|PLYC_ASPFN52491sp|A1DPF0|PLYC_NEOFI52491sp|B0XMA2|PLYC_ASPFC
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 2.53e-47 48 491 16 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q0CLG7 4.18e-45 50 491 18 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B8NQQ7 1.40e-44 50 491 18 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
A1DPF0 1.44e-44 52 491 21 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 6.52e-44 52 491 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001725 0.997023 0.000370 0.000434 0.000226 0.000186

TMHMM  Annotations      download full data without filtering help

start end
21 43