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CAZyme Information: MGYG000003180_00640

You are here: Home > Sequence: MGYG000003180_00640

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900544065
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900544065
CAZyme ID MGYG000003180_00640
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
720 MGYG000003180_16|CGC1 78668.58 4.882
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003180 2090657 MAG United States North America
Gene Location Start: 6540;  End: 8702  Strand: +

Full Sequence      Download help

MSESIYTLRV  SRAAAGAYPT  ISDALAAADQ  LYPVAEQPVM  IRVDPGEYRE  RVEIHRSHVT60
IEGETADSVR  IVGSLCAKMP  SEDGSGVDGT  LGTFRTYTVL  VDADDVRLEN  LTIVNDAGDG120
REVGQAIALY  ADGDRLVVDA  CCITGRQDTL  FLGPLPPREV  KPGGFIGPKQ  FAPRRVGRQY180
FRRCRIEGDV  DFIFGGACAY  FEGCEIRSLN  RNMDVNGYVT  AASTPEGEPY  GFVFHGCSFT240
AAQDVAPDSV  YLGRPWREWA  QTVLIDCWLG  QHIKREGWWD  WNKPAAHERA  CYAGAILHGP300
AGDAAGWVPW  ARELDAAATA  RYAREQVLAG  ADGWGPEGGS  GGAVETASLS  DNGRTVHIDT360
YYEDEPALRD  RLKREGRSAA  FKGATLGDFE  TWQVATRNRL  CDLLGLSLMD  RVPIEVRELD420
RVQIAGGIVR  THAMLQVERD  VWMPFYLLEP  QAPKLDAHGR  KRCYICPHGH  QGAGAASVAG480
VTGVPAVDDA  VRKFNYDYGL  RLARMGYVTV  CPDARGWGYR  RDWKGQGDDE  NSYLRGTCLN540
QARMAEPLGL  TVAGLNAWDN  MRLIDYLEAR  GDIAMDDLGC  FGFSGGGYMT  LYLAALDPRV600
RKAFVSGYLY  GVDDSLLHLN  GNCSCNYVPG  LWRLLDMGDI  ASLIAPRPLL  VQSCEGDHLN660
GARGLANVDE  QLDIVRGAYE  LVGHADDLLH  EVCPGGHHLG  VAHLAEDIEW  LDERAAGVCS720
720

Enzyme Prediction      help

No EC number prediction in MGYG000003180_00640.

CAZyme Signature Domains help

Created with Snap367210814418021625228832436039643246850454057661264868410329CE8455698CE19
Family Start End Evalue family coverage
CE8 10 329 1.2e-79 0.9826388888888888
CE19 455 698 2.7e-25 0.6054216867469879

CDD Domains      download full data without filtering help

Created with Snap36721081441802162522883243603964324685045405766126486846330PemB16311Pectinesterase8314PLN0277310323PLN0270810279PRK10531
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 2.78e-67 6 330 81 404
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 8.75e-50 16 311 10 275
Pectinesterase.
PLN02773 PLN02773 2.26e-45 8 314 7 282
pectinesterase
PLN02708 PLN02708 2.64e-40 10 323 245 538
Probable pectinesterase/pectinesterase inhibitor
PRK10531 PRK10531 2.94e-40 10 279 84 383
putative acyl-CoA thioester hydrolase.

CAZyme Hits      help

Created with Snap36721081441802162522883243603964324685045405766126486841716QIA34433.1|CE81716ATP54718.1|CE88715QUC03567.1|CE88336QRP39805.1|CE88336ASN95501.1|CE8
Hit ID E-Value Query Start Query End Hit Start Hit End
QIA34433.1 0.0 1 716 1 716
ATP54718.1 0.0 1 716 1 716
QUC03567.1 0.0 8 715 7 709
QRP39805.1 6.37e-97 8 336 18 349
ASN95501.1 6.37e-97 8 336 18 349

PDB Hits      download full data without filtering help

Created with Snap3672108144180216252288324360396432468504540576612648684103101XG2_A332893UW0_A182892NSP_A162785C1E_A162785C1C_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 1.07e-27 10 310 7 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
3UW0_A 3.01e-25 33 289 55 311
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
2NSP_A 7.00e-25 18 289 18 287
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
5C1E_A 1.98e-24 16 278 17 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 3.62e-24 16 278 17 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]

Swiss-Prot Hits      download full data without filtering help

Created with Snap36721081441802162522883243603964324685045405766126486848314sp|Q9LVQ0|PME31_ARATH10337sp|Q8GXA1|PME23_ARATH18314sp|Q8L7Q7|PME64_ARATH10310sp|O04887|PME2_CITSI18314sp|Q9LXD9|PME51_ARATH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 8.52e-33 8 314 7 282
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q8GXA1 9.12e-31 10 337 260 559
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
Q8L7Q7 5.11e-29 18 314 301 578
Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana OX=3702 GN=PME64 PE=2 SV=2
O04887 5.72e-29 10 310 205 472
Pectinesterase 2 OS=Citrus sinensis OX=2711 GN=PECS-2.1 PE=2 SV=1
Q9LXD9 3.57e-28 18 314 251 527
Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana OX=3702 GN=PME51 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000053 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003180_00640.