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CAZyme Information: MGYG000004280_00348

You are here: Home > Sequence: MGYG000004280_00348

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900553215
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900553215
CAZyme ID MGYG000004280_00348
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
721 MGYG000004280_24|CGC1 78827.66 4.8992
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004280 1865070 MAG China Asia
Gene Location Start: 6019;  End: 8184  Strand: -

Full Sequence      Download help

MSGKEQLFEV  SLEREGAYRS  ISAALEAAER  CVSDTTVPVR  VLVAPGEYRE  QVEIRRPHVT60
LEGETADSVR  IVGGLGAKMP  SEDGSGQDGR  LGAFRTYTVL  VDADDVTLAG  LTIENNAGDG120
REVGQAIALY  ADGDRLVVDA  CCIKGHQDTL  FLGPLPPREA  KPGGFIGPKQ  FAPRRVGRQY180
FRRCRIEGDV  DFIFGGARAY  FEGCEIRSLN  RDMDVNGYVT  AASTPQGEPY  GFVFHGCSFT240
ADEGIAPGSV  YLGRPWREWA  QTVLLECWLG  PHISLEGWWD  WNKPAAHDGT  LYAGGALFGP300
AGDTAAWVPW  AHCLTGQDSE  RYARDRVLAG  TDGWDPEGGD  GDAVETAGLS  ANGRTVHIET360
YYEDEPALRA  RLKREGRSAA  FTGKTPTDFE  AWKAATRTRL  YDILGLSLMD  RAPIEIRELN420
RVRVAGSIVR  THAVLQVEHD  VWMPFYLLEP  SRPKLDERGL  KRCYICPHGH  QGAGAASIAG480
VAGVPAVDDA  VRKFNYDYGL  RLARMGYVTV  CPDARGWGYR  RDWKGQGDDE  NSYLRGTCLN540
QARMAEPLGL  TVAGLNAWDN  MCLIDYLETR  GDIAMDDLGC  FGFSGGGYMT  LYLAALDPRV600
RKAFVSGYLY  GVDDSLLHLN  GNCSCNYTPG  LWRLLDMGDI  ASLVAPRPLL  VQSCEKDHLN660
GARGLANVDE  QLDIVRDAYA  LLGKDENLLH  EVCPGGHHLG  VAHLAEDIEW  LDSQVAECAH720
A721

Enzyme Prediction      help

No EC number prediction in MGYG000004280_00348.

CAZyme Signature Domains help

Created with Snap367210814418021625228832436039643246850454057661264868410328CE8457698CE19
Family Start End Evalue family coverage
CE8 10 328 5.1e-77 0.9791666666666666
CE19 457 698 3.1e-25 0.5993975903614458

CDD Domains      download full data without filtering help

Created with Snap367210814418021625228832436039643246850454057661264868418330PemB16311Pectinesterase7319PLN0243210337PLN0299010322PLN02773
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 1.41e-62 18 330 94 404
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 1.11e-47 16 311 10 275
Pectinesterase.
PLN02432 PLN02432 2.33e-39 7 319 12 277
putative pectinesterase
PLN02990 PLN02990 5.44e-39 10 337 263 562
Probable pectinesterase/pectinesterase inhibitor
PLN02773 PLN02773 1.58e-38 10 322 9 290
pectinesterase

CAZyme Hits      help

Created with Snap36721081441802162522883243603964324685045405766126486841721ATP54718.1|CE81719QIA34433.1|CE89717QUC03567.1|CE810336QRP39805.1|CE810336ASN95501.1|CE8
Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54718.1 0.0 1 721 1 721
QIA34433.1 0.0 1 719 1 719
QUC03567.1 0.0 9 717 8 711
QRP39805.1 2.73e-103 10 336 20 349
ASN95501.1 2.73e-103 10 336 20 349

PDB Hits      download full data without filtering help

Created with Snap3672108144180216252288324360396432468504540576612648684182883UW0_A152785C1E_A103151XG2_A152785C1C_A103101GQ8_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3UW0_A 7.40e-25 18 288 44 310
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
5C1E_A 1.98e-24 15 278 16 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1XG2_A 2.77e-24 10 315 7 284
ChainA, Pectinesterase 1 [Solanum lycopersicum]
5C1C_A 3.63e-24 15 278 16 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1GQ8_A 1.28e-20 10 310 11 281
Pectinmethylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Created with Snap367210814418021625228832436039643246850454057661264868410337sp|Q8GXA1|PME23_ARATH10334sp|Q43043|PME_PETIN41310sp|Q43062|PME_PRUPE10311sp|O81320|PME38_ARATH10315sp|O04887|PME2_CITSI
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8GXA1 2.07e-36 10 337 260 559
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
Q43043 9.77e-29 10 334 61 359
Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1
Q43062 6.69e-28 41 310 239 482
Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica OX=3760 PE=2 SV=1
O81320 7.35e-28 10 311 167 437
Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana OX=3702 GN=PME38 PE=3 SV=1
O04887 1.92e-27 10 315 205 479
Pectinesterase 2 OS=Citrus sinensis OX=2711 GN=PECS-2.1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000044 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004280_00348.