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CAZyme Information: MGYG000003984_00381

You are here: Home > Sequence: MGYG000003984_00381

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Mediterraneibacter sp900752395
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter; Mediterraneibacter sp900752395
CAZyme ID MGYG000003984_00381
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
428 48277.13 4.4364
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003984 2095190 MAG United Kingdom Europe
Gene Location Start: 60576;  End: 61862  Strand: -

Full Sequence      Download help

MRETENNKMY  KAAMQNEGID  KGTLQINVTS  SVNSYPISEA  RISISYTGVP  ENTLEQLTTD60
SSGQSETIEL  SAPPEEWSLD  PNNERQPYSE  YTLDVSAPGF  EPVSIAGAEI  LANTKAIQNI120
RMRPTDTGRE  EEEIFVIPAH  TLYAEYPPKI  AEDEIKPVNE  SGEIVLSRVV  VPEYIVVHDG180
SPRDSTAKNY  YVKYKDYIKN  VASSEIYATW  PANTIRANVL  AIMSFTLNRV  YTEWYRNKGY240
DFTITSSTAF  DHKWIPERNV  YESISVIVDE  LFANYLSRPN  VRQPILTQYC  DGRRVSCPDW300
MTQWGSKELG  DRGLTPIEIL  RYFYGDDMYI  NIAPEISGVP  SSWPGYILEI  GSSGEKVRQI360
QEQLNVIAGA  YPAIPKITVD  GIYGEATAES  VRKFQEVFGL  PQTGKVDYST  WYKISEIYVG420
VSRIAELT428

Enzyme Prediction      help

No EC number prediction in MGYG000003984_00381.

CDD Domains      download full data without filtering help

Created with Snap21426485107128149171192214235256278299321342363385406353414PG_binding_1348414PGRP344414PGRP36122CarboxypepD_reg
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 9.44e-15 353 414 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 7.16e-10 348 414 39 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 5.69e-05 344 414 117 183
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
pfam13620 CarboxypepD_reg 0.001 36 122 13 81
Carboxypeptidase regulatory-like domain.

CAZyme Hits      help

Created with Snap2142648510712814917119221423525627829932134236338540614427QRT31086.1|GH014427QEI32542.1|GH014427QHB25032.1|GH020428QRT50293.1|GH022427QUO33025.1|GH0
Hit ID E-Value Query Start Query End Hit Start Hit End
QRT31086.1 2.26e-253 14 427 18 431
QEI32542.1 1.21e-252 14 427 16 429
QHB25032.1 1.21e-252 14 427 16 429
QRT50293.1 2.98e-248 20 428 11 419
QUO33025.1 5.86e-234 22 427 12 417

PDB Hits      download full data without filtering help

Created with Snap214264851071281491711922142352562782993213423633854063424171LBU_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1LBU_A 9.22e-06 342 417 5 76
HydrolaseMetallo (zn) Dd-peptidase [Streptomyces albus G]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000065 0.000005 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003984_00381.