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CAZyme Information: MGYG000001265_00366

You are here: Home > Sequence: MGYG000001265_00366

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Methylobacterium sp002778835
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylobacterium; Methylobacterium sp002778835
CAZyme ID MGYG000001265_00366
CAZy Family GH104
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
417 44216.57 9.6837
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001265 4213059 MAG Italy Europe
Gene Location Start: 27142;  End: 28395  Strand: +

Full Sequence      Download help

MTYPAIPAPA  RKLLAFIGLT  EAPQGYETIY  GNNQSKLPKP  LTSMTFDEVV  TAGPAWTKAY60
GSSAAGHYQF  MRNTLDAPRT  LEDIKGEMRL  TGSERFDAAL  QDAMGFHLLK  RRGYDKFMAG120
RLSVTAFGLN  LAKEWASFPV  LRACKGQHRR  VERGQSYYAG  DGQNHALVTP  EAVEALLEEI180
RPAGAAAQAE  AVPAGPVAPV  EAPQLVQPAG  PPAAGFLGRL  RSLFGRAQPA  AAAVPVASPT240
KGDPTVYRVQ  ERLRQINYYR  VGRLDGVDSI  EFRDAVAAAR  KDNGLGDGGL  DAAFLTGLYS300
FGQRPVSKSR  GEMKLPEAIR  YRPEVMAPNV  TVGATGLAGL  FASLAGGAGV  FDKAGATVDR360
VNGYLDTADA  WATKGASVAA  FVGAHWPWLV  GALCAVLVWK  AIVGLADGIA  KIRAAVF417

Enzyme Prediction      help

No EC number prediction in MGYG000001265_00366.

CAZyme Signature Domains help

Created with Snap2041628310412514516618720822925027129131233335437539612149GH104
Family Start End Evalue family coverage
GH104 12 149 6.8e-18 0.8620689655172413

CDD Domains      download full data without filtering help

Created with Snap2041628310412514516618720822925027129131233335437539620150lambda_lys-like
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00736 lambda_lys-like 2.99e-12 20 150 16 127
Bacteriophage lambda lysozyme and similar proteins. Lysozyme from bacteriophage lambda hydrolyzes the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc), as do other lysozymes. However, unlike other lysozymes, bacteriophage lambda does not produce a reducing end upon cleavage of the peptidoglycan, but rather uses the 6-OH of the same MurNAc residue to produce a 1,6-anhydromuramic acid terminal residue and is therefore a lytic transglycosylase. An identical 1,6-anhydro bond is formed in bacterial peptidoglycans by the action of the lytic transglycosylases of E. coli, though they differ structurally.

CAZyme Hits      help

Created with Snap204162831041251451661872082292502712913123333543753966199QFI66838.1|GH05179QND60148.1|GH06342AZO04594.1|GH06210ASY63459.1|GH06208QFP61877.1|GH104
Hit ID E-Value Query Start Query End Hit Start Hit End
QFI66838.1 2.61e-69 6 199 1 200
QND60148.1 7.68e-66 5 179 4 172
AZO04594.1 1.38e-65 6 342 5 302
ASY63459.1 2.49e-65 6 210 5 214
QFP61877.1 4.76e-62 6 208 5 199

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000011 0.000020 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
329 351
384 406