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CAZyme Information: MGYG000001728_00102

You are here: Home > Sequence: MGYG000001728_00102

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1390 sp002305315
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; UBA1390; UBA1390; UBA1390 sp002305315
CAZyme ID MGYG000001728_00102
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1028 MGYG000001728_7|CGC1 117613 5.2663
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001728 2194259 MAG Sweden Europe
Gene Location Start: 1296;  End: 4382  Strand: -

Full Sequence      Download help

MDTKDIFKNP  PAKYRSVPFW  GWDGDLEKEE  LLTQIDTFKR  MGYGGFHMHA  RAGLITPYLS60
DAFMQRVRDC  CEKAQKEGLY  AWLYDEDRYP  SGPAGGIVTR  NPEYTRRYLR  FTAYSYEEDV120
EYTVPQRGFA  RNPQGELLAR  YTVQLDEKGD  LASYRRLAAE  ETASDVWYLY  FEKQPATTDE180
EQTYVDTLNP  EAIQEFARVT  YDRYKETVGD  FFGNVSPAIF  TDEPQYASMG  ELAYAKEKGD240
VILPWSNGFG  EAFLEKEGFD  LLDYMPELIW  NLPQGAASRA  RYLYHDFLSE  RFAASFCDTL300
GRWCEQNGIM  FTGHIMGEGT  LKGQAAIGGE  MMRNYRAFHI  PGIDVLGRHK  LEFTTAKQCQ360
SAVRQQGSVG  MMSELYGVSG  WDFDFRGYKL  QGDWQAAMGV  TLRVPHHALY  TFNGESKRDY420
PASISYQNAW  AGQYHRIEDH  FARVNVALTK  GNPVVRIAVV  HPIESVWLHM  GPNDRSAAIL480
AQYEKNFEEL  IHTLSHGFQD  FDFLSEARLP  QLCEQGGAPL  RVGQMAYDVV  IVPGLETMRS540
TTLERLEAFW  QAGGRLIFMG  TAPRFVDGVR  DNRAERLYHQ  AEHIDMNCNA  LLDCLAPYEF600
LRVNLPDGSA  AQHLVHQLRK  EDDAYWLFLA  TTRSQPSPDV  DIPNQAIKFN  VGQKYETEVL660
RFTLQGEYIL  EVWDTLTGKV  QRLGAQYKEG  KTIFRRKWYM  HDSLLLRLIP  GRCEIAEEPI720
REYPGGRRIF  HKVPVSLSEP  NVYLMDMAEY  ALDQEPYQDL  EEILKLENLC  RERCGLPIRK780
RAMQQPYQMR  KEAARHTIRL  RFTIESEISL  SAPVLAMENM  DVCQLWLDGE  KIEPRDTGWF840
IDRIIRTTPL  PSISAGTHIL  EAEFPLGLNT  KLEYMYLLGD  FGVSVAGCEK  TITAPVRELA900
FGDWTHQGLP  FYSGNVTYHV  SLETQGGGCV  RVPHYRGAMV  GLRVDGGEEQ  PIIYSPYVYD960
LSALAAGCHQ  FDFTLYATRY  NTLAALHHVS  SIPFSQGPDC  WRSTDDLWNY  EYSFVPQGIV1020
SSPRFYEN1028

Enzyme Prediction      help

No EC number prediction in MGYG000001728_00102.

CAZyme Signature Domains help

Created with Snap511021542052573083594114625145656166687197718228739259765692GH106
Family Start End Evalue family coverage
GH106 5 692 4.1e-56 0.7621359223300971

CDD Domains      download full data without filtering help

Created with Snap51102154205257308359411462514565616668719771822873925976175575Glyco_hydro_106458558A4_beta-galactosidase_middle_domain137157GvpO
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 5.65e-09 175 575 391 771
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 4.58e-06 458 558 2 85
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
pfam05800 GvpO 0.006 137 157 65 85
Gas vesicle synthesis protein GvpO. This family consists of archaeal GvpO proteins which are required for gas vesicle synthesis. The family also contains two related sequences from Streptomyces coelicolor.

CAZyme Hits      help

Created with Snap5110215420525730835941146251456561666871977182287392597661026AUS98191.1|GH10631026CEP78513.1|GH10671026AEF82861.1|GH10631025AJG98234.1|GH10671023QNO17272.1|GH106
Hit ID E-Value Query Start Query End Hit Start Hit End
AUS98191.1 0.0 6 1026 15 1034
CEP78513.1 2.80e-312 3 1026 11 1034
AEF82861.1 1.03e-306 7 1026 15 1036
AJG98234.1 3.77e-290 3 1025 12 1032
QNO17272.1 1.94e-276 7 1023 13 1029

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000075 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001728_00102.