logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001046_00369

You are here: Home > Sequence: MGYG000001046_00369

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-103 sp004556965
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; CAG-103; CAG-103 sp004556965
CAZyme ID MGYG000001046_00369
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
626 MGYG000001046_51|CGC1 71107.16 6.5006
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001046 1859156 MAG Denmark Europe
Gene Location Start: 18803;  End: 20683  Strand: -

Full Sequence      Download help

MNHCNWISDA  ALAAFHNGSA  RDAWRTFGCH  EVEPGLHCFA  VWAPHAQRVS  LVGDFNGWDS60
AAHPMTRLDD  GTWVTRADGL  QNGALYKYCI  TGADGKTVLK  ADPFAAHCET  GPATASKVWS120
TEGFAWRDGA  YLRRRAGRDV  FRTPMSIYEL  HLGSWRRDGD  ALPWYRAVAK  ELAAYCTDMG180
YTHVELLPVT  EYPYEGSWGY  QVTGYYAPTS  RYGTPQDFMY  FIDTLHRAGV  GVIIDWVPAH240
FPRDAHGLAN  FDGTRLFECK  EQRMAGHPEW  GTLIFDYDMP  EVQSFLVSSA  MLFFDVYHVD300
GIRVDAVSSM  LYLDYARKPG  EWTPNREGGN  INLGAVDFLR  KLNSAVLSTH  PGCMTIAEES360
SAYPGVTRPP  YDGGLGFSFK  WDMGFMHDTL  DYLATDPYFR  KYHHNKLTFS  MMYAFSENFI420
LAFSHDEVVH  GKKSMIDKMY  GTYEQKFAGL  RALYGYQFAH  PGKKLTFMGS  EFAQFIEWNY480
QQGLDWLLLD  YPMHRAMQSW  CRALNEFYTH  NRALWDIDDS  WDGFTWLNVD  DADRSSIAFL540
RTARSGRKVV  CVCNFTPVHY  TDFVIGLPKK  GVLREALTSD  DARFGGSGIH  NAPEIRSVHE600
PFGRLPYSAR  VELSPLSTVY  FTFTAR626

Enzyme Prediction      help

EC 2.4.1.18

CAZyme Signature Domains help

Created with Snap316293125156187219250281313344375406438469500532563594175474GH1327107CBM48
Family Start End Evalue family coverage
GH13 175 474 2.4e-151 0.9933554817275747
CBM48 27 107 1.7e-18 0.881578947368421

CDD Domains      download full data without filtering help

Created with Snap3162931251561872192502813133443754064384695005325635941621PRK1231315622GlgB39621PRK1470539625PRK147066621PRK05402
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12313 PRK12313 0.0 1 621 1 625
1,4-alpha-glucan branching protein GlgB.
COG0296 GlgB 0.0 15 622 14 627
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].
PRK14705 PRK14705 0.0 39 621 642 1220
glycogen branching enzyme; Provisional
PRK14706 PRK14706 0.0 39 625 42 623
glycogen branching enzyme; Provisional
PRK05402 PRK05402 0.0 6 621 99 721
1,4-alpha-glucan branching protein GlgB.

CAZyme Hits      help

Created with Snap3162931251561872192502813133443754064384695005325635947623ACV22726.1|CBM48|GH13_97623VEH01358.1|CBM48|GH13_96626AYH39927.1|CBM48|GH13_98621CBL01646.1|CBM48|GH13_98621AXB29737.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
ACV22726.1 2.62e-273 7 623 11 633
VEH01358.1 2.62e-273 7 623 11 633
AYH39927.1 4.15e-270 6 626 18 638
CBL01646.1 1.40e-248 8 621 13 631
AXB29737.1 2.85e-247 8 621 13 631

PDB Hits      download full data without filtering help

Created with Snap31629312515618721925028131334437540643846950053256359456196JOY_A76223K1D_A66195GQW_A66195GR5_A66195GQU_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6JOY_A 6.92e-212 5 619 2 614
TheX-ray Crystallographic Structure of Branching Enzyme from Rhodothermus obamensis STB05 [Rhodothermus marinus]
3K1D_A 1.58e-204 7 622 101 720
Crystalstructure of glycogen branching enzyme synonym: 1,4-alpha-D-glucan:1,4-alpha-D-GLUCAN 6-glucosyl-transferase from mycobacterium tuberculosis H37RV [Mycobacterium tuberculosis H37Rv]
5GQW_A 1.41e-201 6 619 128 769
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A 1.99e-201 6 619 128 769
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A 2.82e-201 6 619 128 769
Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap3162931251561872192502813133443754064384695005325635947620sp|Q5NXV7|GLGB_AROAE1620sp|O66936|GLGB_AQUAE15621sp|B8CVY1|GLGB_HALOH7620sp|Q1AZ86|GLGB_RUBXD8621sp|Q21WG7|GLGB_RHOFT
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5NXV7 3.05e-229 7 620 10 624
1,4-alpha-glucan branching enzyme GlgB OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=glgB PE=3 SV=1
O66936 4.97e-229 1 620 1 625
1,4-alpha-glucan branching enzyme GlgB OS=Aquifex aeolicus (strain VF5) OX=224324 GN=glgB PE=3 SV=1
B8CVY1 2.01e-228 15 621 14 625
1,4-alpha-glucan branching enzyme GlgB OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=glgB PE=3 SV=1
Q1AZ86 2.80e-223 7 620 99 716
1,4-alpha-glucan branching enzyme GlgB OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) OX=266117 GN=glgB PE=3 SV=1
Q21WG7 3.35e-218 8 621 3 619
1,4-alpha-glucan branching enzyme GlgB OS=Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) OX=338969 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000062 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001046_00369.