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CAZyme Information: MGYG000001115_00505

You are here: Home > Sequence: MGYG000001115_00505

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Agathobaculum sp900544475
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Butyricicoccaceae; Agathobaculum; Agathobaculum sp900544475
CAZyme ID MGYG000001115_00505
CAZy Family GH13
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
737 84311.63 6.8163
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001115 2249105 MAG China Asia
Gene Location Start: 6987;  End: 9200  Strand: -

Full Sequence      Download help

MRKKSASPDI  EKRSELFYSG  RDCRAYDYMG  AHPFVQDGEQ  GYLFRVYAPE  AANVSVMGEF60
NGWNRDADYM  TRDEQGIWEK  FIPNIQEYTA  YKYSVWAKSG  DVFDKSDPYG  FHFETRPGNA120
TKAYDISGYE  WGDDSWLQWR  KNHLPYSSPI  NIYECHLGSW  KMHEDGNFYS  YRQMADELVP180
YVKEMGYTHI  EFMPLTEYPF  DGSWGYQVIG  YFAATSRYGT  PKDLMYLIDK  AHQAGLGVIM240
DWVPAHFPKD  GCGLVEFDGS  HLYEYADPLK  MEHKEWGTRV  FDYGKVSTRN  LLFSSAMFWI300
EKFHMDGLRV  DAVASMLYLD  YNRQNEWRPN  IHGGRENLEA  VDFLRLLNEY  ILTDHPDVMM360
IAEESTAWPM  VTKPGYDGGL  GFNFKWNMGW  MNDMLCYCSA  DPFFRKDMHD  KITFSFMYAF420
SENYILPLSH  DEVVHGKCSL  IGKMPPPYEN  QFGGLRALYG  YMAAHPGKKM  LFMGGEFAQF480
SEWAYQRGLD  WMLLDYPAHR  QMQAYVKALN  HFYLETPQLW  EQDTDWHGFE  WISHEDNRNN540
IIAFRRIAKD  GSDIVVVVNF  SPEEQGEYRI  GVPIAGTYEE  IFSSDKTEFG  GSGLSNGKVK600
TENKPMHGQE  QSINIKIPRF  GVLFFKGKPK  AKRRTKAEIE  AAKKLAEAEK  KPARKASSKA660
KTTKTVAKKA  KAEVAVKPEA  KVAVKAKAEV  AVKPDAKVAV  KGETAVAKTG  TKAVARTGPK720
DVAVKGETAV  TTVKEDK737

Enzyme Prediction      help

EC 2.4.1.18

CAZyme Signature Domains help

Created with Snap3673110147184221257294331368405442479515552589626663700180479GH13
Family Start End Evalue family coverage
GH13 180 479 4.8e-149 0.9966777408637874

CDD Domains      download full data without filtering help

Created with Snap367311014718422125729433136840544247951555258962666370016630PRK0540216626PRK1470515633PRK1231329626PRK1470616626GlgB
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05402 PRK05402 0.0 16 630 107 726
1,4-alpha-glucan branching protein GlgB.
PRK14705 PRK14705 0.0 16 626 610 1221
glycogen branching enzyme; Provisional
PRK12313 PRK12313 0.0 15 633 13 633
1,4-alpha-glucan branching protein GlgB.
PRK14706 PRK14706 0.0 29 626 27 620
glycogen branching enzyme; Provisional
COG0296 GlgB 0.0 16 626 13 627
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].

CAZyme Hits      help

Created with Snap36731101471842212572943313684054424795155525896266637001638CAB1243441.1|CBM48|GH13_916636BCI60003.1|CBM48|GH13_98635CBL16844.1|CBM48|GH13_91637QNK41917.1|CBM48|GH13_916639QEY35933.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
CAB1243441.1 4.22e-284 1 638 1 641
BCI60003.1 5.81e-282 16 636 15 639
CBL16844.1 5.06e-278 8 635 3 634
QNK41917.1 3.90e-277 1 637 1 637
QEY35933.1 9.55e-277 16 639 14 641

PDB Hits      download full data without filtering help

Created with Snap3673110147184221257294331368405442479515552589626663700166295GQW_A166295GR5_A166295GQU_A166295GR2_A166296KLF_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GQW_A 1.53e-220 16 629 136 775
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A 2.17e-220 16 629 136 775
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A 3.07e-220 16 629 136 775
Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR2_A 8.70e-220 16 629 136 775
Crystalstructure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GR4_A Crystal structure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
6KLF_A 1.42e-219 16 629 112 751
ChainA, 1,4-alpha-glucan branching enzyme GlgB [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap367311014718422125729433136840544247951555258962666370016626sp|Q8DLB8|GLGB_THEVB16626sp|B8CVY1|GLGB_HALOH16629sp|Q2JT08|GLGB_SYNJA16629sp|Q2JK68|GLGB_SYNJB16618sp|P16954|GLGB_SYNE7
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8DLB8 1.17e-239 16 626 113 749
1,4-alpha-glucan branching enzyme GlgB OS=Thermosynechococcus vestitus (strain IAM M-273 / NIES-2133 / BP-1) OX=197221 GN=glgB PE=3 SV=1
B8CVY1 2.33e-238 16 626 13 626
1,4-alpha-glucan branching enzyme GlgB OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=glgB PE=3 SV=1
Q2JT08 4.94e-237 16 629 124 755
1,4-alpha-glucan branching enzyme GlgB OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=glgB PE=3 SV=1
Q2JK68 6.31e-236 16 629 124 755
1,4-alpha-glucan branching enzyme GlgB OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=glgB PE=3 SV=1
P16954 9.12e-236 16 618 122 750
1,4-alpha-glucan branching enzyme GlgB OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=glgB PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000045 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001115_00505.