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CAZyme Information: MGYG000001606_00074

You are here: Home > Sequence: MGYG000001606_00074

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterocloster sp900547035
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Enterocloster; Enterocloster sp900547035
CAZyme ID MGYG000001606_00074
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
917 MGYG000001606_1|CGC2 104745.81 5.9969
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001606 3723499 MAG China Asia
Gene Location Start: 80405;  End: 83158  Strand: +

Full Sequence      Download help

MEQNLYDLMD  WAGIEELVYS  EGANPCRLLG  PHMTDQGLLI  QALIPTAVKV  EVKLLSTGKT60
YPMEMADEAG  FFAALIPRKT  MTAYVLEVTY  DNGTTEELRD  PYSFASRYTE  SDLKKFKAGI120
HYQIYEKMGA  HPMTIDGVEG  VYFSVWAPCA  MRVSVVGDFN  LWDGRRHPME  RLGDSGIFQL180
FIPGLKAGEI  YKYEVKNQRG  EPMLKADPYG  HFAELRPNTA  SVIWDIDHYQ  WQDQEWMKKR240
AASHPKEEPM  LIYEVHLGSW  MRHPFQKDEE  GNDIPGTEFY  NYREIAPLLA  EYVKKMGYTH300
VELLPVMEHP  LDASWGYQVT  GYYAPTSRYG  TPDDFMYFMD  YMHSQGIGVI  LDWVPAHFPR360
DAHGLACFDG  TCVYEHQDPR  KGSHPHWGTL  IYNYGRPEVS  NFLIANALFW  TDKYHADGIR420
MDAVASMLYL  DYGKQDGEWV  ANIYGGNENL  EAVEFLKHLS  SVFHGRKDGA  VLIAEESTAW480
PQVTGKPEDG  GLGFDFKWNM  GWMNDFTSYM  RCDPYFRKYN  YGELTFSMLY  AYSENFVLVF540
SHDEVVHGKG  SMIGKMPGET  LEKKAQNLRA  AYGFMTGHPG  KKLLFMGQDF  AQVDEWNENA600
SLEWNLTEYP  VHQQTQDYVK  ALNHLYRTHP  ALYEKDYDPE  GFQWINCSYD  QESMVIFIRR660
SKKADETLLF  VCNFDNMAHE  KFRLGVPFAG  KYKEILNSDA  EEFGGTGMTN  PRVKTSKAME720
WDELENSIEI  RVAPMSCCVF  SCTPTEEEKA  QKNRKGTKTS  AAKTAEASKA  SENSGAEKKE780
ENAARKTGVR  TVKDKVRKLA  EKKDELGKKA  VQTVESVQKL  ASEKVEKLTT  RKTEPEKLAT840
KKVEAEKLTT  KKVEPEKLST  KKVEVEKLST  KKVEAEKLTT  KKVEPAKLST  KKVEPEKLTA900
KKAEPEKDFG  KNDDEDK917

Enzyme Prediction      help

EC 2.4.1.18

CAZyme Signature Domains help

Created with Snap4591137183229275320366412458504550596641687733779825871291592GH13127209CBM48
Family Start End Evalue family coverage
GH13 291 592 1.8e-150 0.9966777408637874
CBM48 127 209 1.9e-18 0.8552631578947368

CDD Domains      download full data without filtering help

Created with Snap4591137183229275320366412458504550596641687733779825871109744PRK12313112736branching_enzym128754PRK1470625740PRK14705103736GlgB
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12313 PRK12313 0.0 109 744 8 629
1,4-alpha-glucan branching protein GlgB.
TIGR01515 branching_enzym 0.0 112 736 1 613
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. This model describes the glycogen branching enzymes which are responsible for the transfer of chains of approx. 7 alpha(1--4)-linked glucosyl residues to other similar chains (in new alpha(1--6) linkages) in the biosynthesis of glycogen. This enzyme is a member of the broader amylase family of starch hydrolases which fold as (beta/alpha)8 barrels, the so-called TIM-barrel structure. All of the sequences comprising the seed of this model have been experimentally characterized. This model encompasses both bacterial and eukaryotic species. No archaea have this enzyme, although Aquifex aolicus does. Two species, Bacillus thuringiensis and Clostridium perfringens have two sequences each which are annotated as amylases. These annotations are aparrently in error. GP|18143720 from C. perfringens, for instance, contains the note "674 aa, similar to gp:A14658_1 amylase (1,4-alpha-glucan branching enzyme (EC 2.4.1.18) ) from Bacillus thuringiensis (648 aa); 51.1% identity in 632 aa overlap." A branching enzyme from Porphyromonas gingivales, OMNI|PG1793, appears to be more closely related to the eukaryotic species (across a deep phylogenetic split) and may represent an instance of lateral transfer from this species' host. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
PRK14706 PRK14706 0.0 128 754 27 636
glycogen branching enzyme; Provisional
PRK14705 PRK14705 0.0 25 740 519 1220
glycogen branching enzyme; Provisional
COG0296 GlgB 0.0 103 736 1 622
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].

CAZyme Hits      help

Created with Snap45911371832292753203664124585045505966416877337798258711747QRP36905.1|CBM48|GH13_91747ASN98288.1|CBM48|GH13_91747QJU22821.1|CBM48|GH13_91747QIX91704.1|CBM48|GH13_91747ANU47598.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
QRP36905.1 0.0 1 747 1 749
ASN98288.1 0.0 1 747 1 749
QJU22821.1 0.0 1 747 1 749
QIX91704.1 0.0 1 747 1 749
ANU47598.1 0.0 1 747 1 749

PDB Hits      download full data without filtering help

Created with Snap4591137183229275320366412458504550596641687733779825871147465GQW_A147465GR5_A147465GQZ_A147465GQU_A147466KLF_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GQW_A 2.99e-268 14 746 30 777
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A 4.82e-267 14 746 30 777
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQZ_A 6.83e-267 14 746 30 777
Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A 9.67e-267 14 746 30 777
Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
6KLF_A 4.21e-266 14 746 6 753
ChainA, 1,4-alpha-glucan branching enzyme GlgB [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap459113718322927532036641245850455059664168773377982587114740sp|Q8DLB8|GLGB_THEVB14748sp|P52981|GLGB_SYNY316746sp|Q2JT08|GLGB_SYNJA14740sp|Q5N4W5|GLGB_SYNP614740sp|P16954|GLGB_SYNE7
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8DLB8 1.62e-281 14 740 8 748
1,4-alpha-glucan branching enzyme GlgB OS=Thermosynechococcus vestitus (strain IAM M-273 / NIES-2133 / BP-1) OX=197221 GN=glgB PE=3 SV=1
P52981 9.51e-274 14 748 10 758
1,4-alpha-glucan branching enzyme GlgB OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=glgB PE=3 SV=1
Q2JT08 1.76e-271 16 746 12 757
1,4-alpha-glucan branching enzyme GlgB OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=glgB PE=3 SV=1
Q5N4W5 3.42e-267 14 740 17 757
1,4-alpha-glucan branching enzyme GlgB OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=glgB PE=3 SV=1
P16954 3.42e-267 14 740 17 757
1,4-alpha-glucan branching enzyme GlgB OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=glgB PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000063 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001606_00074.