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CAZyme Information: MGYG000001873_00113

You are here: Home > Sequence: MGYG000001873_00113

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Marvinbryantia;
CAZyme ID MGYG000001873_00113
CAZy Family GH13
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
675 77946.15 6.5093
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001873 2665919 MAG Denmark Europe
Gene Location Start: 15885;  End: 17912  Strand: -

Full Sequence      Download help

MGTAKEKEEN  QFDIRIGELD  QYLFGQGTHY  DIYKKLGAHP  TVIDGKKGVH  FAVWAPHAAK60
VHLTGEFCDW  VEDPAYEMKR  LEPLGIYELF  VEGVQVGTQY  KYLICTHDGR  RLYKADPFGN120
HAELRPGTAS  KVADIFNLKW  SDKTWVEKRG  KQDIDAMPMS  IYEVHPGSWM  KHAPTDENPE180
GFYNYREFAH  HITDYVKDMG  YTHVELMGIA  EHPFDGSWGY  QVTGYYAPTA  RYGTPEDFAY240
MVNYFHKNGI  GIILDWVPAH  FPKDACGLAE  FDGQPLFEYA  DPRKGDHPDW  GTKVFDFEKN300
EVRNFLIANA  LYWVEHFHID  GLRVDAVASM  LYLDYGRSDG  QWVPNKYGEN  KNLEAIEFFR360
HLNSIVRRRN  PGVMMIAEES  TAWPQVTGEP  KDGGLGFSLK  WNMGWMHDFL  DYMKLDPYFR420
SYNHNKMTFS  MTYAFSEKFI  LVLSHDEVVH  LKCSMINKMP  GLYDDKFANL  RAGYAYMFAH480
PGKKLLFMGQ  EFAQFQEWSE  ARELDWYLLG  EEKHCQLKEY  VKELLHLYKG  DPAMYTLDQS540
WEGFEWINAN  DSSRSIFSFI  RHSADRKSNL  LFVINFTPVA  RDDYQVGVPQ  SGSYKLVLNS600
DEERFGGTGQ  EQPATFKAVK  GESDGQPYHL  EYKLPPYGVA  VFKYAERKPA  AKKTAESKPA660
EKKTAGRKPR  AKKEK675

Enzyme Prediction      help

EC 2.4.1.18

CAZyme Signature Domains help

Created with Snap3367101135168202236270303337371405438472506540573607641194494GH13
Family Start End Evalue family coverage
GH13 194 494 1.1e-157 0.9966777408637874

CDD Domains      download full data without filtering help

Created with Snap336710113516820223627030333737140543847250654057360764118650PRK1231311643PRK0540236665PRK1470611644GlgB16646PRK14705
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12313 PRK12313 0.0 18 650 9 633
1,4-alpha-glucan branching protein GlgB.
PRK05402 PRK05402 0.0 11 643 95 722
1,4-alpha-glucan branching protein GlgB.
PRK14706 PRK14706 0.0 36 665 27 639
glycogen branching enzyme; Provisional
COG0296 GlgB 0.0 11 644 1 628
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].
PRK14705 PRK14705 0.0 16 646 603 1224
glycogen branching enzyme; Provisional

CAZyme Hits      help

Created with Snap33671011351682022362703033373714054384725065405736076414644QUO31484.1|CBM48|GH13_916644QYX26973.1|CBM48|GH13_913644QRT48547.1|CBM48|GH13_91644QHB24149.1|CBM48|GH13_91644QEI31650.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
QUO31484.1 0.0 4 644 2 637
QYX26973.1 0.0 16 644 11 636
QRT48547.1 0.0 13 644 53 681
QHB24149.1 0.0 1 644 1 641
QEI31650.1 0.0 1 644 1 641

PDB Hits      download full data without filtering help

Created with Snap3367101135168202236270303337371405438472506540573607641206435GR5_A206435GQZ_A206435GR2_A206435GQW_A206435GQU_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GR5_A 6.37e-235 20 643 133 772
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQZ_A 5.14e-234 20 643 133 772
Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GR2_A 5.14e-234 20 643 133 772
Crystalstructure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GR4_A Crystal structure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GQW_A 5.14e-234 20 643 133 772
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GQU_A 7.28e-234 20 643 133 772
Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap336710113516820223627030333737140543847250654057360764114648sp|P30539|GLGB_BUTFI16644sp|Q2JT08|GLGB_SYNJA15653sp|Q8DLB8|GLGB_THEVB16649sp|Q2JK68|GLGB_SYNJB15650sp|Q8YYX9|GLGB_NOSS1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P30539 2.86e-304 14 648 5 636
1,4-alpha-glucan branching enzyme GlgB OS=Butyrivibrio fibrisolvens OX=831 GN=glgB PE=1 SV=1
Q2JT08 4.85e-244 16 644 117 753
1,4-alpha-glucan branching enzyme GlgB OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=glgB PE=3 SV=1
Q8DLB8 4.85e-243 15 653 105 759
1,4-alpha-glucan branching enzyme GlgB OS=Thermosynechococcus vestitus (strain IAM M-273 / NIES-2133 / BP-1) OX=197221 GN=glgB PE=3 SV=1
Q2JK68 1.43e-241 16 649 117 758
1,4-alpha-glucan branching enzyme GlgB OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=glgB PE=3 SV=1
Q8YYX9 3.13e-238 15 650 108 759
1,4-alpha-glucan branching enzyme GlgB OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000063 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001873_00113.