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CAZyme Information: MGYG000003001_00259

You are here: Home > Sequence: MGYG000003001_00259

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Stomatobaculum longum
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Stomatobaculum; Stomatobaculum longum
CAZyme ID MGYG000003001_00259
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
796 88005.87 5.4348
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003001 1905072 MAG United States North America
Gene Location Start: 38366;  End: 40756  Strand: -

Full Sequence      Download help

MERELYEVMD  WAAVEEIVYS  ESADPHAILG  PHKTDKGILV  QAFFPGRDRV  LLQRGKTKMP60
MELADESGFF  ACLIPGEKES  LRYQFILPEA  DGSETVAEDP  YRFMPELPEV  ELRKFKAGES120
TAAHTFLGAH  EKKMGGVSGI  RFAVFAPNAM  RVSVVGDFNN  WDGRVHELRR  MGDSGVFALF180
VPGVEAGALY  KYEIKTYARE  ILFRSDPYAR  AVEPAGGGAS  MIAAAEPDFV  WEDQAYLTER240
AQRYGKFAGE  RPINLYELNL  ASFAADADYR  KLAETLPAYL  KEMHYTHVLL  MPLLETRDAA300
SLGYLTGAYF  ALDTKLGTVD  GFRALVNALH  REDISVLMDW  SAVRFPRTEE  GLAYFDGTPL360
YEENGSSDTA  VFRFGRAEVQ  SFLLSNVSFL  ANEFHLDGVR  VIDMASALWF  QANENRNCYG420
GGENLDGASF  LRRLSLTVHR  KLPGFLLIAD  GSAEWPRTTA  AVKDDGLGFD  FRCNCGFTEG480
MLAYLGADEA  GKSERYGELS  YAQLYQYSEQ  YILPLSHTFL  SEQQPTLLGR  LGYLPFEERI540
ALLRAFFGFV  TAHPGKKLLF  AGQEFGMLEP  LQADGHLNFS  LLDFPSHRKL  RDCAAGLNAF600
YLEHPVLYEG  DSDTEGFTFL  NCHSYKENVV  VFLRRAAEED  ILVAVNFSGT  SYPRFNLGVP660
YAGSYKEIFS  TDDERFGGSG  TLNPRALPAR  AMEVDDKEIG  IGIRLPAYSA  LFFACKKREA720
EKKAPRAEQA  EEKPAKQKTE  SLLEKAADVA  GKAAGVAGKA  KDAAGKKAAG  VAGKAAGVAG780
SAKKRIDRAM  GMEKKK796

Enzyme Prediction      help

No EC number prediction in MGYG000003001_00259.

CAZyme Signature Domains help

Created with Snap3979119159199238278318358398437477517557597636676716756279566GH13127211CBM48
Family Start End Evalue family coverage
GH13 279 566 1.6e-81 0.9900332225913622
CBM48 127 211 6e-17 0.881578947368421

CDD Domains      download full data without filtering help

Created with Snap397911915919923827831835839843747751755759763667671675612717PRK05402104718PRK123139714PRK14705102714GlgB14717PRK12568
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05402 PRK05402 0.0 12 717 4 725
1,4-alpha-glucan branching protein GlgB.
PRK12313 PRK12313 0.0 104 718 4 630
1,4-alpha-glucan branching protein GlgB.
PRK14705 PRK14705 5.20e-154 9 714 503 1221
glycogen branching enzyme; Provisional
COG0296 GlgB 8.93e-152 102 714 1 627
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].
PRK12568 PRK12568 1.04e-144 14 717 15 730
glycogen branching enzyme; Provisional

CAZyme Hits      help

Created with Snap39791191591992382783183583984374775175575976366767167561715CBK76766.1|CBM48|GH13_91715CBL36572.1|CBM48|GH13_91725SET97328.1|CBM48|GH13_91706QNM09059.1|CBM48|GH13_91715QRV19504.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
CBK76766.1 4.46e-186 1 715 1 742
CBL36572.1 8.87e-186 1 715 1 742
SET97328.1 1.74e-182 1 725 1 749
QNM09059.1 2.38e-182 1 706 1 721
QRV19504.1 1.69e-180 1 715 1 742

PDB Hits      download full data without filtering help

Created with Snap3979119159199238278318358398437477517557597636676716756147115GQW_A147116KLF_A147115GR5_A147115GQZ_A147115GQU_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GQW_A 2.21e-126 14 711 30 769
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
6KLF_A 2.25e-126 14 711 6 745
ChainA, 1,4-alpha-glucan branching enzyme GlgB [Crocosphaera subtropica ATCC 51142]
5GR5_A 6.10e-126 14 711 30 769
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQZ_A 8.56e-126 14 711 30 769
Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A 1.20e-125 14 711 30 769
Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap397911915919923827831835839843747751755759763667671675613712sp|Q1AZ86|GLGB_RUBXD10711sp|Q8PR13|GLGB1_XANAC10711sp|Q2P949|GLGB2_XANOM10711sp|Q5H6H2|GLGB1_XANOR10711sp|Q3BZE1|GLGB1_XANC5
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1AZ86 1.71e-139 13 712 6 716
1,4-alpha-glucan branching enzyme GlgB OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) OX=266117 GN=glgB PE=3 SV=1
Q8PR13 2.79e-138 10 711 6 718
1,4-alpha-glucan branching enzyme GlgB 1 OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=glgB1 PE=3 SV=1
Q2P949 1.33e-137 10 711 13 725
1,4-alpha-glucan branching enzyme GlgB 2 OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) OX=342109 GN=glgB2 PE=3 SV=1
Q5H6H2 1.50e-136 10 711 14 726
1,4-alpha-glucan branching enzyme GlgB 1 OS=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) OX=291331 GN=glgB1 PE=3 SV=1
Q3BZE1 1.50e-136 10 711 14 726
1,4-alpha-glucan branching enzyme GlgB 1 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) OX=316273 GN=glgB1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000063 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003001_00259.