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CAZyme Information: MGYG000003375_00062

You are here: Home > Sequence: MGYG000003375_00062

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium striatum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium striatum
CAZyme ID MGYG000003375_00062
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
706 MGYG000003375_3|CGC1 79885.76 4.8836
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003375 2788808 MAG United States North America
Gene Location Start: 50650;  End: 52770  Strand: +

Full Sequence      Download help

MTIPEPDLSR  LNNCRHHAPH  AFYGWHEGLV  RTRRPGAEAV  QLVTAAGAVD  MSPVGHDLWE60
ATLPQEQDYR  LRVTYPGQTP  VDVADGYHFL  PTLGTLDLHL  ISEGRHERLW  DVLGANLKSY120
DTDLGTVDGV  AFAVWAPNAE  GVAVIGDFCG  WNPTQYPMRS  LGSTGVWEVF  IPGISEGEHY180
KFAIQTRDGR  RIDKADPLAK  RTIAPPETAS  VVSANRYEWN  DAAWLEQRNG  DLNVPMSVYE240
LHVGSWKIGS  NYNSLREELI  PYLQEHGFTH  VELLPVAEHP  FGGSWGYQVS  GYYSPSARWG300
TPDDLRALVD  ALHGAGIGVI  VDWVPAHFPK  DDFALGRFDG  QALYEHPDPR  RGEQSDWGTY360
VFDFGRNEVR  NFLVANALYW  AEEFHIDGLR  VDAVASMLYL  DYSRDEWLPN  QYGGREYLEA420
VQFLQETNAT  LNRVHPGVLT  IAEESTSWPG  VTAPTDQGGL  GFSLKWNMGW  MNDTLEYFKH480
EPIHRQYHHG  ELTFSMIYAY  SERYVLPFSH  DEVVHGKGSL  WTRMPGDDWN  KAAGLRALYG540
YMFSHPGKNL  LFMGQEFGQT  TEWNESNSVD  WSNLEGWGNE  WHHGIKRLVR  DINAVYKDTP600
ALWSQDFAPE  GFQWVKSDDS  NNNMLGYVRY  GTDGSALLAV  CNFSGSSVPN  YNLWLPRDGA660
WEMILNTDDA  VYQGAGNDLP  RWIHSQGNYT  ELHLPSNSVQ  WYLFRG706

Enzyme Prediction      help

EC 2.4.1.18

CAZyme Signature Domains help

Created with Snap3570105141176211247282317353388423458494529564600635670261559GH13113204CBM48
Family Start End Evalue family coverage
GH13 261 559 1.7e-158 0.9966777408637874
CBM48 113 204 2.4e-17 0.9210526315789473

CDD Domains      download full data without filtering help

Created with Snap35701051411762112472823173533884234584945295646006356703702PRK05402106699PRK147068676PRK1470596688PRK1231330695PRK12568
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05402 PRK05402 0.0 3 702 1 721
1,4-alpha-glucan branching protein GlgB.
PRK14706 PRK14706 0.0 106 699 9 616
glycogen branching enzyme; Provisional
PRK14705 PRK14705 0.0 8 676 508 1187
glycogen branching enzyme; Provisional
PRK12313 PRK12313 0.0 96 688 10 604
1,4-alpha-glucan branching protein GlgB.
PRK12568 PRK12568 0.0 30 695 42 719
glycogen branching enzyme; Provisional

CAZyme Hits      help

Created with Snap35701051411762112472823173533884234584945295646006356701706ATZ07677.1|CBM48|GH13_91706QQE53357.1|CBM48|GH13_91706ATZ05556.1|CBM48|GH13_91706ART21464.1|CBM48|GH13_91706AJI78722.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
ATZ07677.1 0.0 1 706 1 706
QQE53357.1 0.0 1 706 1 706
ATZ05556.1 0.0 1 706 1 706
ART21464.1 0.0 1 706 1 706
AJI78722.1 0.0 1 706 1 706

PDB Hits      download full data without filtering help

Created with Snap357010514117621124728231735338842345849452956460063567047013K1D_A1006851M7X_A26995GQW_A26995GR5_A26995GQZ_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3K1D_A 7.20e-305 4 701 5 718
Crystalstructure of glycogen branching enzyme synonym: 1,4-alpha-D-glucan:1,4-alpha-D-GLUCAN 6-glucosyl-transferase from mycobacterium tuberculosis H37RV [Mycobacterium tuberculosis H37Rv]
1M7X_A 2.06e-215 100 685 1 588
TheX-ray Crystallographic Structure of Branching Enzyme [Escherichia coli],1M7X_B The X-ray Crystallographic Structure of Branching Enzyme [Escherichia coli],1M7X_C The X-ray Crystallographic Structure of Branching Enzyme [Escherichia coli],1M7X_D The X-ray Crystallographic Structure of Branching Enzyme [Escherichia coli]
5GQW_A 3.18e-214 2 699 24 768
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A 3.18e-214 2 699 24 768
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQZ_A 9.00e-214 2 699 24 768
Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap35701051411762112472823173533884234584945295646006356701702sp|Q8NR40|GLGB_CORGL1701sp|Q0SGR9|GLGB_RHOJR1702sp|Q6NHR6|GLGB_CORDI1706sp|Q8FQ12|GLGB_COREF4676sp|Q73X75|GLGB_MYCPA
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8NR40 0.0 1 702 9 727
1,4-alpha-glucan branching enzyme GlgB OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=glgB PE=3 SV=1
Q0SGR9 0.0 1 701 1 727
1,4-alpha-glucan branching enzyme GlgB OS=Rhodococcus jostii (strain RHA1) OX=101510 GN=glgB PE=3 SV=1
Q6NHR6 0.0 1 702 7 728
1,4-alpha-glucan branching enzyme GlgB OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) OX=257309 GN=glgB PE=3 SV=1
Q8FQ12 0.0 1 706 9 731
1,4-alpha-glucan branching enzyme GlgB OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) OX=196164 GN=glgB PE=3 SV=1
Q73X75 4.00e-311 4 676 14 695
1,4-alpha-glucan branching enzyme GlgB OS=Mycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10) OX=262316 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000065 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003375_00062.