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CAZyme Information: MGYG000003825_00243

You are here: Home > Sequence: MGYG000003825_00243

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1777 sp900549645
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; UBA1777; UBA1777 sp900549645
CAZyme ID MGYG000003825_00243
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
634 72916.5 6.3883
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003825 2022533 MAG United States North America
Gene Location Start: 66416;  End: 68320  Strand: -

Full Sequence      Download help

MNDREKKFIP  DEDVYLFNTG  CARKAWLSFG  CRYIPELGAH  RFVVWAPNAQ  RVSLVGDFNS60
WDRTATPMER  IDGGVWVCFV  EGLSDGVLYK  FCVTGADGRE  ILKSDPFAAW  SEHGENTASK120
VWNGGNYKWT  DEGYMSRRAA  RNFMCEPMSI  YELHPGSWRN  LNGKKPAYRE  LADSLSVYCK180
HMGFTHVELM  PVTEYPYDGS  WGYQVTGYYA  PTSRYGSPDD  FKYLVDKLHH  TGIGVIMDWV240
PAHFPKDEHG  LANFDGTPLF  ECKERRMAEH  PEWGTLVFDY  ASDQVQSFLV  SSACKFFEEY300
HIDGIRVDAV  SSMLYLDYGR  RPGEFTPNRN  GGNINLDAVT  FLQKLNSTVL  VNYPGAVTVA360
EESTAFPKIS  APPEDGGLGF  CFKWDMGFMH  DTLDYMSMDP  LYRSHHHDKL  TFSMMYAFSE420
NYVLAYSHDE  VVHCKKSMID  KMFGDYDQKF  SSLRALYGYQ  FAHPGKKLIF  MGGEFGQFIE480
WNWRQGLDWL  LLDYPRHEQL  RQYYRALNRI  YTATPAMYGR  DHGWDGFKWL  NVDDRERSSV540
AFMRMEPDAE  KGAYLVCACN  FTPVRYDGFQ  IGLPMAGTLK  EILNSDDERF  GGSGVKNPGA600
VRTRREPFLD  MQHSARIVLP  PMSCVYYEFK  PRKK634

Enzyme Prediction      help

No EC number prediction in MGYG000003825_00243.

CAZyme Signature Domains help

Created with Snap316395126158190221253285317348380412443475507538570602178477GH1329109CBM48
Family Start End Evalue family coverage
GH13 178 477 8.7e-150 0.9933554817275747
CBM48 29 109 5.9e-18 0.868421052631579

CDD Domains      download full data without filtering help

Created with Snap31639512615819022125328531734838041244347550753857060211634PRK123139628GlgB13631PRK1470537629PRK147069634PRK05402
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12313 PRK12313 0.0 11 634 9 632
1,4-alpha-glucan branching protein GlgB.
COG0296 GlgB 0.0 9 628 6 627
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].
PRK14705 PRK14705 0.0 13 631 607 1222
glycogen branching enzyme; Provisional
PRK14706 PRK14706 0.0 37 629 27 621
glycogen branching enzyme; Provisional
PRK05402 PRK05402 0.0 9 634 100 726
1,4-alpha-glucan branching protein GlgB.

CAZyme Hits      help

Created with Snap3163951261581902212532853173483804124434755075385706026634AYH39927.1|CBM48|GH13_99629ACV22726.1|CBM48|GH13_99629VEH01358.1|CBM48|GH13_99629QMW70941.1|CBM48|GH13_99629BCD36168.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
AYH39927.1 1.77e-278 6 634 16 640
ACV22726.1 5.44e-270 9 629 11 633
VEH01358.1 5.44e-270 9 629 11 633
QMW70941.1 7.70e-243 9 629 5 637
BCD36168.1 7.70e-243 9 629 5 637

PDB Hits      download full data without filtering help

Created with Snap31639512615819022125328531734838041244347550753857060286335GQW_A86335GR5_A86335GQZ_A86335GQU_A86335GR2_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GQW_A 2.71e-209 8 633 128 777
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A 3.84e-209 8 633 128 777
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQZ_A 5.43e-209 8 633 128 777
Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A 7.68e-209 8 633 128 777
Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR2_A 2.18e-208 8 633 128 777
Crystalstructure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GR4_A Crystal structure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap3163951261581902212532853173483804124434755075385706027631sp|B8CVY1|GLGB_HALOH6626sp|O66936|GLGB_AQUAE9626sp|Q5NXV7|GLGB_AROAE11631sp|Q21WG7|GLGB_RHOFT9631sp|Q1AZ86|GLGB_RUBXD
Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8CVY1 1.16e-224 7 631 4 627
1,4-alpha-glucan branching enzyme GlgB OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=glgB PE=3 SV=1
O66936 1.33e-223 6 626 2 625
1,4-alpha-glucan branching enzyme GlgB OS=Aquifex aeolicus (strain VF5) OX=224324 GN=glgB PE=3 SV=1
Q5NXV7 6.12e-221 9 626 10 624
1,4-alpha-glucan branching enzyme GlgB OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=glgB PE=3 SV=1
Q21WG7 9.65e-220 11 631 4 623
1,4-alpha-glucan branching enzyme GlgB OS=Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) OX=338969 GN=glgB PE=3 SV=1
Q1AZ86 2.57e-218 9 631 99 721
1,4-alpha-glucan branching enzyme GlgB OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) OX=266117 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000047 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003825_00243.