logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004739_00094

You are here: Home > Sequence: MGYG000004739_00094

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Actinomyces sp000220835
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Actinomyces; Actinomyces sp000220835
CAZyme ID MGYG000004739_00094
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
737 MGYG000004739_2|CGC1 81964.41 4.6174
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004739 2692200 MAG China Asia
Gene Location Start: 39263;  End: 41476  Strand: -

Full Sequence      Download help

MTDVATPEPA  RTPVHVDPWI  LADVAYARYH  NPHEVLGAHV  GEDGVTIRTV  RHLADAVAVV60
TAGGVFPAEH  EQDGVWVAVV  PGQTVPDYRI  EVTYGEETTT  VDDPYRFLPT  LGEMDTYLIS120
EGRHEGLWEV  LGAHLKHYSG  PMGEVEGVAF  AVWAPNARAV  RVVGDFNYWD  GTASAMRSLG180
ASGVWELFVP  GVGVGARYKF  ELCFSDGSWH  QKADPLARAT  EVPPATASVV  TDRFHEWGDA240
DWMAKRAITD  PHSGPMSIYE  VHVGSWRQGL  GYRGLADELV  PYVKEAGFTH  VEFLPVAEHP300
FGGSWGYQIT  GYYAPTARFG  TPDDFRYLVD  QLHQAGIGVI  LDWVPAHFPK  DDWALARFDG360
TALYEDPDPQ  RGEHPDWGTY  VFNFGRNEVR  NFLVANALYW  MGEFHADGLR  VDAVASMLYL420
DYSREEGQWH  PNQFGGRENL  EAISFLQEAT  ATAYRKNPGT  VMIAEESTAW  PGVTAPTEYG480
GLGFGLKWNM  GWMNDTLRYL  AEEPINRRYH  HGELTFSLVY  AFSEQFVLPM  SHDEVVHGKG540
SLLSKMPGDP  WQELAGLRAL  YAYQWSHPGK  QLLFMGQEFG  QGAEWNAENS  LDWWILDDPG600
HQELLKLVSD  LNRFYTESPA  LWADDFSHRG  FEWIEAGDGD  HNVLSYLRKG  TGPDGRADLM660
VAVINFAGTP  HEGYRVGLPF  AGGWDEVINT  DAPEYGGSGV  VNLGHVEAEE  LPWNGRPASV720
RLRVPPLGAV  FLRPSQD737

Enzyme Prediction      help

EC 2.4.1.18

CAZyme Signature Domains help

Created with Snap3673110147184221257294331368405442479515552589626663700281581GH13131221CBM48
Family Start End Evalue family coverage
GH13 281 581 2e-162 0.9966777408637874
CBM48 131 221 5.3e-18 0.9078947368421053

CDD Domains      download full data without filtering help

Created with Snap367311014718422125729433136840544247951555258962666370016737PRK054021735PRK14705109736PRK12313130737PRK14706106734GlgB
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05402 PRK05402 0.0 16 737 1 726
1,4-alpha-glucan branching protein GlgB.
PRK14705 PRK14705 0.0 1 735 488 1223
glycogen branching enzyme; Provisional
PRK12313 PRK12313 0.0 109 736 5 629
1,4-alpha-glucan branching protein GlgB.
PRK14706 PRK14706 0.0 130 737 26 624
glycogen branching enzyme; Provisional
COG0296 GlgB 0.0 106 734 1 628
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].

CAZyme Hits      help

Created with Snap36731101471842212572943313684054424795155525896266637001737CED91062.1|CBM48|GH13_91737QQM66893.1|CBM48|GH13_91737VEG30063.1|CBM48|GH13_91737VEG54793.1|CBM48|GH13_99737ALC99599.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
CED91062.1 0.0 1 737 1 750
QQM66893.1 0.0 1 737 1 737
VEG30063.1 0.0 1 737 1 743
VEG54793.1 0.0 1 737 1 737
ALC99599.1 0.0 9 737 19 748

PDB Hits      download full data without filtering help

Created with Snap3673110147184221257294331368405442479515552589626663700177353K1D_A157335GQW_A157335GR5_A157335GR1_A157335GR0_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3K1D_A 1.65e-316 17 735 6 722
Crystalstructure of glycogen branching enzyme synonym: 1,4-alpha-D-glucan:1,4-alpha-D-GLUCAN 6-glucosyl-transferase from mycobacterium tuberculosis H37RV [Mycobacterium tuberculosis H37Rv]
5GQW_A 1.07e-252 15 733 20 772
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A 1.51e-252 15 733 20 772
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GR1_A 1.51e-252 15 733 20 772
Crystalstructure of branching enzyme Y500A/D501A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142],5GR6_A Crystal structure of branching enzyme Y500A/D501A double mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GR0_A 2.14e-252 15 733 20 772
Crystalstructure of branching enzyme D501A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap367311014718422125729433136840544247951555258962666370024732sp|Q5Z0W8|GLGB_NOCFA29735sp|Q2J6Q9|GLGB_FRACC29732sp|Q47SE7|GLGB_THEFY27734sp|Q8G5L0|GLGB_BIFLO29732sp|Q0SGR9|GLGB_RHOJR
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5Z0W8 0.0 24 732 35 739
1,4-alpha-glucan branching enzyme GlgB OS=Nocardia farcinica (strain IFM 10152) OX=247156 GN=glgB PE=3 SV=1
Q2J6Q9 0.0 29 735 104 812
1,4-alpha-glucan branching enzyme GlgB OS=Frankia casuarinae (strain DSM 45818 / CECT 9043 / CcI3) OX=106370 GN=glgB PE=3 SV=1
Q47SE7 0.0 29 732 42 744
1,4-alpha-glucan branching enzyme GlgB OS=Thermobifida fusca (strain YX) OX=269800 GN=glgB PE=3 SV=1
Q8G5L0 0.0 27 734 14 735
1,4-alpha-glucan branching enzyme GlgB OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=glgB PE=3 SV=1
Q0SGR9 0.0 29 732 24 728
1,4-alpha-glucan branching enzyme GlgB OS=Rhodococcus jostii (strain RHA1) OX=101510 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000045 0.000010 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004739_00094.