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CAZyme Information: MGYG000000245_00083

You are here: Home > Sequence: MGYG000000245_00083

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Roseburia sp003470905
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia; Roseburia sp003470905
CAZyme ID MGYG000000245_00083
CAZy Family GH136
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
428 MGYG000000245_1|CGC3 47806.75 4.9859
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000245 4145433 Isolate China Asia
Gene Location Start: 91319;  End: 92605  Strand: +

Full Sequence      Download help

MTDLCRKYYV  DSINGNDTND  GLSENSAFAS  LFAVNRLALK  PGDHILLACG  SVFEKQFLQI60
RDSGTKQMPI  VIGSYGCGED  PLIKTDGQGI  WYQDYGKELD  SPTHVYHGYV  SSAVLLFDAE120
YIIIQDIEIT  NSADKVIGEN  YSQADKMERT  GVAVVAKEKG  LRCGITLRNL  KIHDVHGNVY180
DKHMNNGGIY  MTALQPAEEA  MTGVARFSDI  LVEGCYVYRV  SRWGIAVGYS  YAHEKFAGAE240
LDKKRFLKYG  HENIVIRDNY  VKMAGGDGIT  VMYALRPFVE  HNMTDSVACE  INDRIYCNPG300
NRGGKVAAAI  WPWKCKDALF  RYNEVADTRL  NQDGMAYDAD  SGDGTVYEYN  YSRQNEGGCV360
MFCMQEAIHN  TFRNNVSYDD  LGGTISPSEN  PDALLTDNIF  YVRKGVPFVR  KNMDGGNFTE420
ENNQIIQL428

Enzyme Prediction      help

No EC number prediction in MGYG000000245_00083.

CAZyme Signature Domains help

Created with Snap214264851071281491711922142352562782993213423633854066423GH136
Family Start End Evalue family coverage
GH136 6 423 1.9e-137 0.7678207739307535

CDD Domains      help

MGYG000000245_00083 has no CDD domain.

CAZyme Hits      help

Created with Snap214264851071281491711922142352562782993213423633854061428CBL11957.1|GH1361428VCV21936.1|GH1361428QNM03227.1|GH1361428AEN95945.1|GH136|3.2.1.1408425ERK42296.1|GH136|3.2.1.140
Hit ID E-Value Query Start Query End Hit Start Hit End
CBL11957.1 0.0 1 428 1 428
VCV21936.1 0.0 1 428 1 428
QNM03227.1 2.82e-243 1 428 1 429
AEN95945.1 2.04e-240 1 428 1 433
ERK42296.1 2.63e-190 8 425 245 660

PDB Hits      download full data without filtering help

Created with Snap2142648510712814917119221423525627829932134236338540684256KQT_A84256KQS_A84237V6M_A84225GQC_A84027V6I_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6KQT_A 1.03e-191 8 425 247 662
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A 3.29e-185 8 425 247 662
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]
7V6M_A 1.11e-126 8 423 11 453
ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
5GQC_A 6.41e-99 8 422 20 472
Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
7V6I_A 3.71e-90 8 402 16 464
ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000049 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000245_00083.