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CAZyme Information: MGYG000000222_00056

You are here: Home > Sequence: MGYG000000222_00056

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides sp003473295
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp003473295
CAZyme ID MGYG000000222_00056
CAZy Family GH140
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
481 55420.73 8.7213
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000222 4189286 Isolate China Asia
Gene Location Start: 70971;  End: 72416  Strand: -

Full Sequence      Download help

MKNRKRILIL  GALILSVGCI  EAQISKFSKK  QKEFMKSRLV  ISENKRFLQY  NDGTPFFYLG60
DTAWELFHRL  DKEEVDLYLE  DRARKGFTVI  QAVALAELNG  INEPNAYGFL  PFENNDPSKP120
LIKEGFGNDY  WDHVDYVVKK  ANELNLYIGF  LPTWGRYWHD  GTPVFNKQNA  RSYGEFLGRR180
YKNAQIIWIL  GGDRNPDNEN  QKEVIRAMAE  GLRKGDEGIH  LRTFHPTGGH  GSAQFFHTEN240
WLDFNMRQNG  HEVEYTSYSK  TAEDYNRTPV  KPIIDGEPLY  EDHPIAFQAN  RRGHSIASDI300
RRALYWDLFN  GAFGHTYGHH  SVWQMYNPEQ  FKPINNPLLP  WYDAIHQQGS  EQMVYGRLLI360
ESRPFFSRIP  ATDKLLVTGK  VPTSMPGEGR  YRFVATCDQE  CSYAMVYAPV  GREFTVRMNV420
LSGSKIKAWW  YNPRTGKATH  AGTYPNKGEK  TFISPDLGEM  VDWILVLDDA  SKKYPAPGKN480
K481

Enzyme Prediction      help

No EC number prediction in MGYG000000222_00056.

CAZyme Signature Domains help

Created with Snap2448729612014416819221624026428831233636038440843245638465GH140
Family Start End Evalue family coverage
GH140 38 465 4e-150 0.9951456310679612

CDD Domains      download full data without filtering help

Created with Snap2448729612014416819221624026428831233636038440843245644363DUF4038386468Collagen_bind_2
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13204 DUF4038 4.78e-148 44 363 1 320
Protein of unknown function (DUF4038). A family of putative cellulases.
pfam12904 Collagen_bind_2 3.01e-27 386 468 11 92
Putative collagen-binding domain of a collagenase. This domain is likely to be the collagen-binding domain of a family of bacterial collagenase enzymes. It is the C-terminal part of the Structure 3kzs (information derived from TOPSAN).

CAZyme Hits      help

Created with Snap2448729612014416819221624026428831233636038440843245613480SCD21826.1|GH14038478QEL19752.1|GH14041479AMV36743.1|GH14038475QJW98933.1|GH14039478QDV38338.1|GH140
Hit ID E-Value Query Start Query End Hit Start Hit End
SCD21826.1 2.30e-231 13 480 10 480
QEL19752.1 1.67e-225 38 478 27 471
AMV36743.1 3.99e-216 41 479 34 475
QJW98933.1 3.50e-211 38 475 24 464
QDV38338.1 1.78e-204 39 478 31 473

PDB Hits      download full data without filtering help

Created with Snap24487296120144168192216240264288312336360384408432456294745MSY_A294743KZS_A384744QFU_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MSY_A 4.06e-88 29 474 5 451
Glycosidehydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_B Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_C Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482]
3KZS_A 2.99e-84 29 474 5 451
Crystalstructure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_B Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_C Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_D Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482]
4QFU_A 1.15e-82 38 474 30 467
ChainA, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_B Chain B, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_C Chain C, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_D Chain D, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_E Chain E, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_F Chain F, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_G Chain G, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_H Chain H, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_I Chain I, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_J Chain J, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_K Chain K, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_L Chain L, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000791 0.453318 0.544865 0.000419 0.000330 0.000246

TMHMM  Annotations      download full data without filtering help

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