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CAZyme Information: MGYG000000313_00063

You are here: Home > Sequence: MGYG000000313_00063

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella vaginalis
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella vaginalis
CAZyme ID MGYG000000313_00063
CAZy Family GH140
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
444 MGYG000000313_4|CGC1 49103.15 4.5235
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000313 1450348 MAG Sweden Europe
Gene Location Start: 12791;  End: 14125  Strand: +

Full Sequence      Download help

MSLGTLTVND  AKDGFLLDGR  PWFWLADTCW  SAFTSVSLED  WDYYLARRAE  QGVNVLQVNT60
LPQWDRCRPD  LGIYPYASED  GTRFDWGSPN  PAYWERARTM  AEMAEAHGIR  LALVLIWCNV120
VPGTGGAAIA  EKTGSSLMPV  EGACAHVRRV  VAELGSFDPV  YIVSGDTDFK  SEETIAYYDR180
VLDEVCDAAP  GALRCLHINR  GNRTIPEGYL  DRLDFYLYQP  GHNYAAQYEA  WRLPEDLRGT240
YPKKPMLNSE  PCYEQMGASR  NVYWRFSAHD  CRASAWAGIL  AGASAGVTYG  AHGVWNWQTS300
ASAGSVLGEG  FDASFRWQEC  LQFPGVWDFG  LIPEILRGLG  QGEAPSVRPA  QELLDDAREQ360
IRVGAVGNSI  VAYLPFATKL  KLKGLDEVLP  DAAAWSATAF  DLETKRLARL  QVEADSEGDC420
LSVPQHPFEH  DALVVVEGLP  TERS444

Enzyme Prediction      help

No EC number prediction in MGYG000000313_00063.

CAZyme Signature Domains help

Created with Snap224466881111331551771992222442662883103333553773994216382GH140
Family Start End Evalue family coverage
GH140 6 382 4.2e-81 0.883495145631068

CDD Domains      download full data without filtering help

Created with Snap2244668811113315517719922224426628831033335537739942118339DUF4038
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13204 DUF4038 3.67e-80 18 339 9 320
Protein of unknown function (DUF4038). A family of putative cellulases.

CAZyme Hits      help

Created with Snap224466881111331551771992222442662883103333553773994211437QWT17210.1|GH1401436AZH70520.1|GH1401436ATP54527.1|GH1401444AEB07692.1|GH1403442QRT29801.1|GH140
Hit ID E-Value Query Start Query End Hit Start Hit End
QWT17210.1 1.78e-237 1 437 1 436
AZH70520.1 1.39e-222 1 436 1 433
ATP54527.1 2.29e-221 1 436 1 433
AEB07692.1 5.01e-193 1 444 1 460
QRT29801.1 1.84e-139 3 442 1 428

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000041 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000313_00063.