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CAZyme Information: MGYG000002582_00255

You are here: Home > Sequence: MGYG000002582_00255

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Succinivibrio sp900552905
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Succinivibrionaceae; Succinivibrio; Succinivibrio sp900552905
CAZyme ID MGYG000002582_00255
CAZy Family GH140
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
441 MGYG000002582_3|CGC1 50759.75 5.8716
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002582 1765105 MAG China Asia
Gene Location Start: 80398;  End: 81723  Strand: +

Full Sequence      Download help

MKLHVKFKKI  FDENNKLFFY  TADTAWEIFH  KLTFKEAQYF  LDNRAAKGYN  AIQAVAVAEL60
DGLKTPTYEG  NLLPFSDLDN  LTVNDDYFDH  VERVIRYANS  KGIFVTLVPM  WGCHIVANLA120
WGNSVKPIFD  APKAYNFVKY  LARRFKELDI  IWMLGGDRPL  GDPKVRSIIE  AMARAIREEV180
GHDQLITAHT  QSGLSLWDML  DKPDYLDFVT  WQTGHMGQNY  PAWRPMQKDY  ERLDIPVLNS240
EPCYESHPIM  ASTSWKRLDN  FTRFSDKEVR  RSSYWSVFSS  GAGITYGCYG  IWQMRRKEDE300
AKAIPESAAA  AYQNDTIPYW  SDSLNFPAAF  QIPFIKRFIE  KLPKVETLRP  AKELLLSDNP360
TGAGHIEVLS  NATYDFIAAY  IPEPTSICVD  ISVFGGAFDL  YWYDPRYNIY  NNPITENTER420
QFFSIETPAT  GGDYVMLLIK  R441

Enzyme Prediction      help

No EC number prediction in MGYG000002582_00255.

CAZyme Signature Domains help

Created with Snap2244668811013215417619822024226428630833035237439641810435GH140
Family Start End Evalue family coverage
GH140 10 435 1.3e-94 0.9684466019417476

CDD Domains      download full data without filtering help

Created with Snap2244668811013215417619822024226428630833035237439641812342DUF4038350438Collagen_bind_2
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13204 DUF4038 1.33e-99 12 342 7 320
Protein of unknown function (DUF4038). A family of putative cellulases.
pfam12904 Collagen_bind_2 0.004 350 438 2 91
Putative collagen-binding domain of a collagenase. This domain is likely to be the collagen-binding domain of a family of bacterial collagenase enzymes. It is the C-terminal part of the Structure 3kzs (information derived from TOPSAN).

CAZyme Hits      help

Created with Snap224466881101321541761982202422642863083303523743964182441AUV02051.1|GH1402438AWQ19632.1|GH1402438AVG76174.1|GH1402438ADD76253.1|GH1402438QKV87450.1|GH140
Hit ID E-Value Query Start Query End Hit Start Hit End
AUV02051.1 5.11e-166 2 441 3 443
AWQ19632.1 4.97e-161 2 438 3 439
AVG76174.1 7.05e-161 2 438 3 439
ADD76253.1 1.00e-160 2 438 3 439
QKV87450.1 1.00e-160 2 438 3 439

PDB Hits      download full data without filtering help

Created with Snap22446688110132154176198220242264286308330352374396418134065MSY_A134063KZS_A134064QFU_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MSY_A 2.04e-33 13 406 30 411
Glycosidehydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_B Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_C Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482]
3KZS_A 9.02e-32 13 406 30 411
Crystalstructure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_B Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_C Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_D Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482]
4QFU_A 1.15e-31 13 406 43 427
ChainA, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_B Chain B, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_C Chain C, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_D Chain D, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_E Chain E, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_F Chain F, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_G Chain G, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_H Chain H, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_I Chain I, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_J Chain J, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_K Chain K, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_L Chain L, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000055 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002582_00255.