logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003274_00174

You are here: Home > Sequence: MGYG000003274_00174

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900762355
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900762355
CAZyme ID MGYG000003274_00174
CAZy Family GH140
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
437 MGYG000003274_6|CGC1 49131.31 4.7933
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003274 2117693 MAG Peru South America
Gene Location Start: 14259;  End: 15572  Strand: +

Full Sequence      Download help

MSLGKLTVNG  RQDGFLCEGK  PFFWFADTCW  SAFTSIPEAD  WDYYLTRRAE  QGMNVLQINT60
LPQWDRCCPD  LGIWPYASED  GVRFDWSQPN  QAYWDRAAAM  CRAAVEHGIR  PALVLMWCNY120
VPGTWGAKIA  ERCGAEVMPR  EEVRAHVARV  VENLGEFDPV  YVVTGDTDFA  GDEAIAYYED180
ALDEVAKRAP  EALRTMHINR  GNRTIPAQYL  DRLDFYMFQP  GHNYEGQPEA  WHLPQDFIAS240
YPKKPMVNSE  PCYEQMGASR  NVYWRFTAQD  CRASVWSSIL  AGASAGVTYG  AHGVWNWQTS300
RSQGSVLGEG  FDMPFRWQEC  LQFAGVWDFA  AIEHVLAGLG  ATASDDALAV  IPAQELLDDA360
RESIRVARIG  ERVVTYLPRT  TALTFKLDSA  RGWSATALDM  EAKRIAKLPV  RDNGDGTVRV420
AQHSFEHDAL  VILTPER437

Enzyme Prediction      help

No EC number prediction in MGYG000003274_00174.

CAZyme Signature Domains help

Created with Snap2143658710913115217419621824026228430532734937139341517399GH140
Family Start End Evalue family coverage
GH140 17 399 2.3e-86 0.8883495145631068

CDD Domains      download full data without filtering help

Created with Snap2143658710913115217419621824026228430532734937139341519339DUF4038
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13204 DUF4038 2.33e-80 19 339 10 320
Protein of unknown function (DUF4038). A family of putative cellulases.

CAZyme Hits      help

Created with Snap214365871091311521741962182402622843053273493713934151437ATP54527.1|GH1401437AZH70520.1|GH1401433QWT17210.1|GH1401435AEB07692.1|GH1403437QRT29801.1|GH140
Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54527.1 0.0 1 437 1 437
AZH70520.1 2.78e-308 1 437 1 437
QWT17210.1 7.05e-200 1 433 1 435
AEB07692.1 1.01e-195 1 435 1 456
QRT29801.1 9.64e-148 3 437 1 426

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000053 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003274_00174.