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CAZyme Information: MGYG000004680_00297

You are here: Home > Sequence: MGYG000004680_00297

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lacrimispora;
CAZyme ID MGYG000004680_00297
CAZy Family GH141
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
746 MGYG000004680_3|CGC1 80740.7 6.0628
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004680 3596809 MAG Germany Europe
Gene Location Start: 39655;  End: 41895  Strand: -

Full Sequence      Download help

MKKRKGRMFF  VVSVLINLFI  FCLGGERVEA  ASSYYVSVTG  NDATGTGTLA  NPWKTIQKAA60
DSMKAGDTCI  IRGGTYRETV  TMKTSGTSAK  PISFQAYKGE  TVTVSGADPV  TDWVKDSGSI120
YYASMNGSLG  TKDQIFVNKQ  MQIQARWPNS  AQQNPMNATF  ASVDSGSASM  IQDESLTQKA180
GYWVGKTVWC  VSGTGYKSYQ  STITGSNPGS  ITFDPIEIPA  AAGNSYYITG  DLNDLDSPGE240
WYYDSPTDRL  YLWAPGGENP  NNLTVEAKKR  TYAFDLSSRS  YINITGINIF  ASSIKMAGSN300
SCKVSDLKGE  YISHDSDVTK  QYSTGIFMSG  TNNELRDSTL  TYSSGNLVSI  QGTGNQLINN360
LIHEADYSAA  DIPAIYLLGA  NHLISHNTVY  NAGRHLIFMP  TQNSRIQYND  LYNAGKLTKD420
CGILYEFAWD  GQGTVIHHNY  IHDNLAKNYS  GTGIYLDNGS  KNYIVHHNVV  WGNYTGIRLN480
TPSNFNLIYN  NTTYNNGNIG  YWGSKFQSDM  YGDRIFNNIF  TTAFTLPGTH  IEGNNITSGT540
DPLFENPAAG  DFRLKAASPA  VDAGVVIPGI  TGDYAGSGPD  IGAYEYGGSK  WTPGHDFSFP600
PDPVFEDVSV  LYINKVRQSD  LEKGVISPWV  PTHSKTAAGV  SVSRSGSKSV  RLGTGEDGIK660
QTVTGLSPNT  TYVCTAWVKA  DPGEQVEIGV  NGFGGTKVSQ  TSDRTDWTMV  QIPFTTGAGA720
VNATVYAYKK  SGAAYVYVDD  FGVAEQ746

Enzyme Prediction      help

No EC number prediction in MGYG000004680_00297.

CAZyme Signature Domains help

Created with Snap377411114918622326129833537341044748452255959663467170833267GH141616728CBM16
Family Start End Evalue family coverage
GH141 33 267 1.6e-27 0.4819734345351044
CBM16 616 728 4.1e-18 0.9655172413793104

CDD Domains      download full data without filtering help

Created with Snap3774111149186223261298335373410447484522559596634671708324488Beta_helix322491NosD614726CBM_4_9342488NosD374491Beta_helix
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 2.03e-13 324 488 1 153
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam05048 NosD 5.11e-07 322 491 18 170
Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.
pfam02018 CBM_4_9 1.44e-06 614 726 2 127
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.
pfam05048 NosD 7.22e-05 342 488 16 144
Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.
pfam13229 Beta_helix 0.001 374 491 2 108
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Created with Snap37741111491862232612983353734104474845225595966346717081746AHM67318.1|CBM161746AIY08095.1|CBM161746AJE52964.1|CBM161746QOH63199.1|CBM161746AZH30628.1|CBM16
Hit ID E-Value Query Start Query End Hit Start Hit End
AHM67318.1 0.0 1 746 1 746
AIY08095.1 0.0 1 746 1 746
AJE52964.1 0.0 1 746 1 746
QOH63199.1 0.0 1 746 1 746
AZH30628.1 0.0 1 746 1 746

PDB Hits      download full data without filtering help

Created with Snap3774111149186223261298335373410447484522559596634671708341283VST_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3VST_A 5.15e-11 34 128 3 97
Thecomplex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_B The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_C The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_D The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_A The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_B The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_C The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_D The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_A The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_B The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_C The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_D The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485]

Swiss-Prot Hits      download full data without filtering help

Created with Snap3774111149186223261298335373410447484522559596634671708585741sp|Q9ZG90|KSBGL_SPHMU11106sp|P94576|YWOF_BACSU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9ZG90 8.55e-17 585 741 260 417
Keratan-sulfate endo-1,4-beta-galactosidase OS=Sphingobacterium multivorum OX=28454 PE=1 SV=1
P94576 2.74e-10 11 106 12 107
Uncharacterized protein YwoF OS=Bacillus subtilis (strain 168) OX=224308 GN=ywoF PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000584 0.992681 0.006084 0.000249 0.000184 0.000172

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004680_00297.