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CAZyme Information: MGYG000003743_00352

You are here: Home > Sequence: MGYG000003743_00352

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Filifactoraceae; Filifactor;
CAZyme ID MGYG000003743_00352
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
418 MGYG000003743_32|CGC1 46523.61 8.4419
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003743 1302624 MAG Canada North America
Gene Location Start: 5666;  End: 6922  Strand: -

Full Sequence      Download help

MKFINRLCIV  MASIIILGYS  YAFAETLDQT  FQKLDNFIQN  NMLEKNKSDA  RVILGSERLL60
SEYSYLIDGK  KIGLVTNQTA  IDSNGISTIN  KLKNYDKAKL  VSLYSPEHGI  DGKAKAGDYV120
KSYIDKNINL  PVYSLYGDTR  KPTPDMLKNI  DVLIFEIQDI  GSRTYTYMST  LNYVMKAAHE180
NNIPIIVLDR  PNPLGANIVE  GPVVKDKYIT  FVGVDNLALS  HGMTAGELAM  FFNRKIGSDL240
TVIPMLGYTR  DMTWGDTGLK  FVQTSPYIPD  YKAAFLYMAT  GMGETTGIRM  SQNFSWVGGP300
NLDSNLYADK  LNSYGLKGVY  FKPAPTSTLG  GVKVVITDEH  TFNPAMTGIY  TLMTANSIRP360
VTVLGEKNGK  IPMFEKLWGG  TSMSEALLSG  KSPDEFIAGY  QSELEEFKNI  RSKYLIYK418

Enzyme Prediction      help

No EC number prediction in MGYG000003743_00352.

CAZyme Signature Domains help

Created with Snap2041628310412514616718820922925027129231333435537639772417GH171
Family Start End Evalue family coverage
GH171 72 417 6.9e-107 0.9971830985915493

CDD Domains      download full data without filtering help

Created with Snap2041628310412514616718820922925027129231333435537639773417DUF134347417YbbC146227PBP1_sensor_kinase-like174227PBP1_galactofuranose_YtfQ-like
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07075 DUF1343 1.02e-153 73 417 1 362
Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
COG3876 YbbC 6.14e-118 47 417 21 409
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].
cd06308 PBP1_sensor_kinase-like 2.89e-04 146 227 53 113
periplasmic binding domain of two-component sensor kinase signaling systems. Periplasmic binding domain of two-component sensor kinase signaling systems, some of which are fused with a C-terminal histidine kinase A domain (HisK) and/or a signal receiver domain (REC). Members of this group share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily and are predicted to be involved in sensing of environmental stimuli; their substrate specificities, however, are not known in detail.
cd06309 PBP1_galactofuranose_YtfQ-like 0.005 174 227 72 115
periplasmic binding domain of ABC-type galactofuranose YtfQ-like transport systems. Periplasmic binding domain of ABC-type YtfQ-like transport systems. The YtfQ protein from Escherichia coli is up-regulated under glucose-limited conditions and shares homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their ligand specificity is not determined experimentally.

CAZyme Hits      help

Created with Snap204162831041251461671882092292502712923133343553763978418EFE27594.2|GH17154417QGU96809.1|GH17151417CBH20341.1|GH17150418VEJ36366.1|GH17144417QYY44643.1|GH171
Hit ID E-Value Query Start Query End Hit Start Hit End
EFE27594.2 8.12e-161 8 418 6 421
QGU96809.1 4.74e-156 54 417 12 374
CBH20341.1 1.21e-154 51 417 51 417
VEJ36366.1 7.78e-150 50 418 174 541
QYY44643.1 1.38e-143 44 417 16 386

PDB Hits      download full data without filtering help

Created with Snap20416283104125146167188209229250271292313334355376397514184K05_A474184JJA_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4K05_A 1.79e-69 51 418 12 399
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]
4JJA_A 1.19e-43 47 418 3 369
Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Created with Snap2041628310412514616718820922925027129231333435537639751417sp|P40407|YBBC_BACSU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 9.75e-93 51 417 36 414
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000330 0.998911 0.000218 0.000174 0.000169 0.000168

TMHMM  Annotations      download full data without filtering help

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