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CAZyme Information: MGYG000003378_00067

You are here: Home > Sequence: MGYG000003378_00067

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Chimaeribacter arupi
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Chimaeribacter; Chimaeribacter arupi
CAZyme ID MGYG000003378_00067
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
730 80759.06 4.84
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003378 4918955 MAG United States North America
Gene Location Start: 10719;  End: 12911  Strand: +

Full Sequence      Download help

MKLTLISKAL  LAVGLTAGAA  SAFALEAWNG  QEGGDTMQVI  FDGNVYQNAW  WVGADNCPKE60
AAADEANNPW  RYLRTATSAE  MAEYGNPTTC  EINGGGTPVV  HDAFSSDKAY  QQGDIVKYQE120
NTYKANGAVP  ANSFIPAQGN  PWQRYMPVET  WNASKTYNKG  DVVKVDGQSY  EALFYTIGNN180
PADPANQNPQ  GNNGRPWKPL  GPTVEYTPEQ  LAAAPQFNTS  ALYPAGQLVQ  FQGQPYVAQT240
KVQHASPTDI  NPWAVYIDWA  GTKERVGTPK  NPWPAHVYAP  YVDFSLNSIP  DLAKLAKEQN300
VNHFTMAFVV  AKSGDQCLPT  WGTAYNLQDY  TQYSKIKALR  EAGGDIMVSI  GGANNAPLAA360
ACKNDADLTQ  LYHDIVDNLN  LNVLDFDIEG  TWVADHESIQ  RRNRAVKAVQ  AKWQEEGRKV420
GIWYTLPILP  TGLTAEGLYV  LEDARDAGVD  LAGVNVMTMD  YGNAICQSDG  TEGQNIHGTC480
ATSAIENMFH  QLKKIWPAKS  DKEINAMMGT  TPMIGYNDVQ  GEVFYQSDAK  LVMEDAVKRD540
LGMVGIWSMA  RDQPGIAKQV  SPEHSGMTEQ  QAPMYAYSKI  FAPFTHDDAK  TNCCHRWGEN600
DRKGAIGDIY  LSDDFYGQGK  AYFNLMGTGS  DGKYWYYPAT  KSNNRYWIYL  GDTEEQAIAN660
NQELMKYHRW  GENGGKGKLG  DVYLSNPDST  HLALYKLIAL  NSDQTYGYYP  RYKESNQYWE720
YVGDVTLNLK  730

Enzyme Prediction      help

EC 3.2.1.14

CDD Domains      download full data without filtering help

Created with Snap3673109146182219255292328365401438474511547584620657693276582GH18_PF-ChiA-like150186ChiC_BD299464Glyco_hydro_18148186ChtBD3278389GH18_chitinase-like
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd06543 GH18_PF-ChiA-like 9.78e-111 276 582 1 294
PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.
cd12215 ChiC_BD 6.15e-06 150 186 2 38
Chitin-binding domain of chitinase C. Chitin-binding domain of chitinase C (ChiC) of Streptomyces griseus and related proteins. Chitinase C is a family 19 chitinase, and consists of a N-terminal chitin binding domain and a C-terminal chitin-catalytic domain that effects degradation. Chitinases function in invertebrates in the degradation of old exoskeletons, in fungi to utilize chitin in cell walls, and in bacteria which use chitin as an energy source. ChiC contains the characteristic chitin-binding aromatic residues.
pfam00704 Glyco_hydro_18 8.22e-06 299 464 21 180
Glycosyl hydrolases family 18.
smart00495 ChtBD3 4.91e-05 148 186 1 39
Chitin-binding domain type 3.
cd00598 GH18_chitinase-like 0.002 278 389 1 113
The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are included in this alignment model.

CAZyme Hits      help

Created with Snap36731091461822192552923283654014384745115475846206576931590QLO82529.1|CBM5|GH181590QKE22293.1|CBM5|GH181590QYO51062.1|CBM5|GH181634QLV38157.1|CBM5|GH181634AUV28473.1|CBM5|GH18
Hit ID E-Value Query Start Query End Hit Start Hit End
QLO82529.1 0.0 1 590 1 589
QKE22293.1 0.0 1 590 1 589
QYO51062.1 0.0 1 590 1 589
QLV38157.1 0.0 1 634 1 637
AUV28473.1 0.0 1 634 1 637

PDB Hits      download full data without filtering help

Created with Snap36731091461822192552923283654014384745115475846206576932675842DSK_A2675843A4W_A2675843A4X_A251266OGD_C
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2DSK_A 3.40e-43 267 584 1 292
Crystalstructure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus [Pyrococcus furiosus],2DSK_B Crystal structure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus [Pyrococcus furiosus]
3A4W_A 2.26e-42 267 584 1 292
Crystalstructures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus],3A4W_B Crystal structures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus]
3A4X_A 4.26e-42 267 584 1 292
Crystalstructures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus],3A4X_B Crystal structures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus],3AFB_A Crystal structures of catalytic site mutants of active domain 2 of chitinase from Pyrococcus furiosus [Pyrococcus furiosus],3AFB_B Crystal structures of catalytic site mutants of active domain 2 of chitinase from Pyrococcus furiosus [Pyrococcus furiosus]
6OGD_C 1.97e-10 25 126 24 128
Cryo-EMstructure of YenTcA in its prepore state [Yersinia entomophaga],6OGD_F Cryo-EM structure of YenTcA in its prepore state [Yersinia entomophaga],6OGD_I Cryo-EM structure of YenTcA in its prepore state [Yersinia entomophaga],6OGD_L Cryo-EM structure of YenTcA in its prepore state [Yersinia entomophaga],6OGD_O Cryo-EM structure of YenTcA in its prepore state [Yersinia entomophaga]

Swiss-Prot Hits      download full data without filtering help

Created with Snap367310914618221925529232836540143847451154758462065769323585sp|P13656|CHIA_ECOLI39554sp|O74199|CHI11_METAN279582sp|P14529|CHIT_SACEN25126sp|B6A879|CHI2_YERET
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P13656 3.21e-265 23 585 335 895
Probable bifunctional chitinase/lysozyme OS=Escherichia coli (strain K12) OX=83333 GN=chiA PE=1 SV=2
O74199 1.14e-211 39 554 1 511
Endochitinase 11 OS=Metarhizium anisopliae OX=5530 GN=chi11 PE=1 SV=1
P14529 1.68e-17 279 582 44 322
Chitinase OS=Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) OX=405948 GN=chiA2 PE=1 SV=2
B6A879 1.08e-09 25 126 24 128
Chitinase 2 OS=Yersinia entomophaga OX=935293 GN=chi2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000255 0.999125 0.000145 0.000176 0.000145 0.000139

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003378_00067.