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CAZyme Information: MGYG000000013_01268

You are here: Home > Sequence: MGYG000000013_01268

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp902362375
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902362375
CAZyme ID MGYG000000013_01268
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1024 MGYG000000013_3|CGC5 116508.59 7.0199
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000013 6368149 Isolate United Kingdom Europe
Gene Location Start: 308767;  End: 311841  Strand: +

Full Sequence      Download help

MNNLKKRTFL  ILSAVLAATT  FMLAQQQPLP  EWQSQYAVGL  NKLAPHTYVW  PYANASDIEK60
PGGYEQSPFY  MSLNGKWKFH  WVKNPDNRPK  DFYQPSYYTG  GWADINVPGN  WEPQGYGTAI120
YVNETYEFDD  KMFNFKKNPP  LVPYAENEVG  SYRRTFKVPA  DWQGRRVVLC  CEGVISFYYV180
WVNGKLLGYN  QGSKTAAEWD  ITDVLNEGEN  VVALEVYRWS  SGAYLECQDM  WRLSGIERDV240
YLYSTPKQYI  ADYKLNASLD  KEKYKDGIFG  LEVTVEGPSA  TTSSIAYTLK  DADGKAVLQD300
AIRIKSRGLS  NFIAFEEKKL  PGVKAWSAEH  PYLYTLMLEL  KDEQGKVTEL  TGCEVGFRTS360
EIKDGRFCIN  GVPVLVKGTN  RHEHSQLGRT  VSKELMELDI  KLMKQHNINT  VRNSHYPTHP420
YWYQLCDRYG  LYMIDEANIE  SHGMGYGLAS  LAKDSTWLTA  HMDRTHRMYE  RSKNHPAIVI480
WSLGNEAGNG  INFERTYDWL  KSVEKTRPVQ  YERAELNYNT  DIYCRMYRSV  DDIKAYVNEK540
DIYRPFILCE  YLHAMGNSCG  GLKEYWDVFE  NNPMAQGGCV  WDWVDQSFRE  IDKNGKWYWT600
YGGDYGPEGI  PSFGNFCCNG  LVGANREPHP  HLLEVKKVYQ  NIKATLANQK  NLTIRVKNWY660
DFSNLNEYIL  NWNVTADNGK  ILAEGTKMVD  CAPHATVDVT  LGAVKFPNTV  REAYLNISWT720
RREASSMIDK  DWEVAYDQFV  LAGNKNYTGY  RPQKAGETTF  TVDKKTGALT  SLNLNGKDLL780
AAPLTLSLFR  PATDNDNRDK  NGARLWRDAG  LDGLTQKVIS  LKESKTSTTA  RVEILNAKNQ840
KVGTADFVYS  LDKNGALKVH  TTFQPDTTIV  KSIARLGLIF  RVANSYDQVS  YLGRGDNETY900
VDRNQSGKIG  VYQTTPERMF  HYYVAPQATG  NRTDVRWAKL  ADTSGEGIFV  ESDRAFQFSI960
IPFSDVLLEK  ARHINELERD  GLLTVHLDAE  QAGVGTATCG  PGVLPQYLVP  LKKQSFEFTL1020
YPVK1024

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap5110215320425630735840946051256361466571676881987092197265907GH2
Family Start End Evalue family coverage
GH2 65 907 3.1e-216 0.964095744680851

CDD Domains      download full data without filtering help

Created with Snap51102153204256307358409460512563614665716768819870921972321020lacZ321023ebgA72910LacZ361643Glyco_hydro_2_C7541020Bgal_small_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 0.0 32 1020 17 1024
beta-galactosidase.
PRK10340 ebgA 0.0 32 1023 4 1000
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 2.35e-160 72 910 14 807
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 7.85e-103 361 643 2 301
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038 Bgal_small_N 2.04e-100 754 1020 1 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits      help

Created with Snap5110215320425630735840946051256361466571676881987092197211024QNL38601.1|GH231024CBK69498.1|GH231024QRN02241.1|GH231024QGT74167.1|GH231024QRQ57907.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QNL38601.1 0.0 1 1024 1 1024
CBK69498.1 0.0 3 1024 6 1029
QRN02241.1 0.0 3 1024 2 1025
QGT74167.1 0.0 3 1024 2 1024
QRQ57907.1 0.0 3 1024 6 1028

PDB Hits      download full data without filtering help

Created with Snap511021532042563073584094605125636146657167688198709219723010243DEC_A2610243BGA_A3110196S6Z_A3110196SD0_A319951JZ7_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DEC_A 0.0 30 1024 5 998
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 0.0 26 1024 4 1002
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
6S6Z_A 1.55e-227 31 1019 3 976
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 1.60e-227 31 1019 4 977
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
1JZ7_A 7.42e-172 31 995 15 994
E.COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_B E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_C E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_D E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],4TTG_A Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_B Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_C Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_D Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Created with Snap51102153204256307358409460512563614665716768819870921972311019sp|Q56307|BGAL_THEMA30995sp|O52847|BGAL_PRIM3311019sp|A3FEW8|BGAL_ENTAG311019sp|A4W7D2|BGAL_ENT38311019sp|Q47077|BGAL1_ENTCL
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 8.76e-227 31 1019 4 977
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 5.91e-213 30 995 18 1004
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
A3FEW8 6.51e-192 31 1019 17 1024
Beta-galactosidase OS=Enterobacter agglomerans OX=549 GN=lacZ PE=1 SV=2
A4W7D2 2.55e-191 31 1019 17 1024
Beta-galactosidase OS=Enterobacter sp. (strain 638) OX=399742 GN=lacZ PE=3 SV=1
Q47077 1.19e-184 31 1019 17 1023
Beta-galactosidase OS=Enterobacter cloacae OX=550 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.343694 0.636670 0.016733 0.001499 0.000689 0.000690

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000013_01268.