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CAZyme Information: MGYG000000013_02972

You are here: Home > Sequence: MGYG000000013_02972

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp902362375
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902362375
CAZyme ID MGYG000000013_02972
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1029 MGYG000000013_7|CGC4 116111.43 5.6781
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000013 6368149 Isolate United Kingdom Europe
Gene Location Start: 123963;  End: 127052  Strand: -

Full Sequence      Download help

MINKLGLIIV  SVILALIQTG  CAEQSTWMSL  NSSNPRIIWE  VKPQADLENI  TGEQISTPEF60
KMSDYVKGVV  PGTVFTAYVE  AGIVPDPNYA  DNIYKVDETF  YNRPFWYRTE  FELPSSYSEG120
KRVWLHFDNT  NRFADFYFNG  EKISGTKTST  KDVSGHMLRS  KFDVTNLIKK  SGKNVIAVLI180
TDADQKKTRK  AKDPYGVACS  PSYLAGAGWD  WMPYVPGRLA  GITGNAYLVV  TGDVVMEDPW240
VRSELPTLQK  AELSVSTDIR  NASSSPKEVV  VSGVIQPGNI  SFSKDIRVEG  GTTARLSINK300
DDIAQLVVDH  PRLWWPNGYG  DPNLYTCKLT  CSVDGKVSDV  KEMTFGIKKY  EYKMVDNVVG360
YPVLTFFING  QKIYLKGGNW  GMSEYLLRCQ  GKEYETKIRL  HKEMNYNMIR  LWTGCVTDDE420
FYDYCDKYGI  MVWNDFWLYV  AYNDVAQPEA  FKANALDKVR  RLRNHPSIAI  WCGANETHPA480
PDLDNYLREM  IAKEDNNDRM  YKSCSNQDGL  SGSGWWGNQP  PRHHFETSGS  NLAFNTPAYP540
YGIDHGYGMR  TEIGTATFPT  FESIKEFIPQ  KDWWPLPTDE  QLKNDDDNVW  NKHFFGKEAS600
NANPVNYKNS  VNTQYGESSG  LEEFCEKAQM  LNLEVMKGMY  EAWNDKMWND  AAGLLIWMSH660
PAYPSFVWQT  YDYYYDPTGA  YWGAKKACEP  LHIQWNASNN  SIKVINTTAK  DLKGAIAKAT720
IYDLNGKEVS  AYGQTKQVDV  AASNITEAFS  LNFNPFNLAY  GKKAVASSSA  GASKSASMVT780
DGGAGSRWES  AYSDPQWIYI  DLGREEKIEK  VILKWEAACA  KKYELQVSND  AQEWKTVYVN840
KDGRGGTEQI  ELEPVTARYV  KLAGISRATQ  FGYSLFEFEI  YGEKPKEIEE  LTPLHFIKLE900
LTDAKGNLIS  ENFYWRNGVN  DLDYKLLNTL  PEADLSCRLV  DKSMSDGKMK  IVVKNNSGTV960
AFANRVRLVN  KATQKRILPI  IMSDNYVTLM  PGEEKVITME  ATPELLKGGV  SVLVKQYGKA1020
EKNKLDIVD1029

Enzyme Prediction      help

No EC number prediction in MGYG000000013_02972.

CAZyme Signature Domains help

Created with Snap5110215420525730836041146351456561766872077182387492697764762GH2765879CBM32
Family Start End Evalue family coverage
GH2 64 762 7.5e-91 0.6728723404255319
CBM32 765 879 5.6e-26 0.9354838709677419

CDD Domains      download full data without filtering help

Created with Snap5110215420525730836041146351456561766872077182387492697766503LacZ9121014Ig_GlcNase107500ebgA780875F5_F8_type_C237348Glyco_hydro_2
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 3.24e-44 66 503 30 433
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam18368 Ig_GlcNase 7.25e-27 912 1014 1 99
Exo-beta-D-glucosaminidase Ig-fold domain. This domain can be found in 2 glycoside hydrolase subfamily of beta-glucosaminidases (EC:3.2.1.165) such as CsxA, from Amycolatopsis orientalis that has exo-beta-D-glucosaminidase (exo-chitosanase) activity. It has an immunoglobulin-like topology.
PRK10340 ebgA 2.63e-18 107 500 113 471
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam00754 F5_F8_type_C 4.90e-18 780 875 18 123
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00703 Glyco_hydro_2 1.72e-17 237 348 4 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Created with Snap5110215420525730836041146351456561766872077182387492697711029ALJ48923.1|CBM32|GH211029SCV08342.1|CBM32|GH211029QRQ55737.1|CBM32|GH211029QUR41762.1|CBM32|GH211029QGT73475.1|CBM32|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ48923.1 0.0 1 1029 1 1029
SCV08342.1 0.0 1 1029 1 1029
QRQ55737.1 0.0 1 1029 1 1029
QUR41762.1 0.0 1 1029 1 1029
QGT73475.1 0.0 1 1029 1 1029

PDB Hits      download full data without filtering help

Created with Snap51102154205257308360411463514565617668720771823874926977557362VZT_A557362VZO_A557362VZS_A557362VZU_A677405N6U_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2VZT_A 2.02e-54 55 736 71 719
Complexof Amycolatopsis orientalis exo-chitosanase CsxA E541A with PNP-beta-D-glucosamine [Amycolatopsis orientalis],2VZT_B Complex of Amycolatopsis orientalis exo-chitosanase CsxA E541A with PNP-beta-D-glucosamine [Amycolatopsis orientalis],2VZV_A Substrate Complex of Amycolatopsis orientalis exo-chitosanase CsxA E541A with chitosan [Amycolatopsis orientalis],2VZV_B Substrate Complex of Amycolatopsis orientalis exo-chitosanase CsxA E541A with chitosan [Amycolatopsis orientalis]
2VZO_A 2.02e-54 55 736 71 719
Crystalstructure of Amycolatopsis orientalis exo-chitosanase CsxA [Amycolatopsis orientalis],2VZO_B Crystal structure of Amycolatopsis orientalis exo-chitosanase CsxA [Amycolatopsis orientalis]
2VZS_A 4.77e-54 55 736 71 719
ChitosanProduct complex of Amycolatopsis orientalis exo-chitosanase CsxA [Amycolatopsis orientalis],2VZS_B Chitosan Product complex of Amycolatopsis orientalis exo-chitosanase CsxA [Amycolatopsis orientalis],2X05_A Inhibition of the exo-beta-D-glucosaminidase CsxA by a glucosamine- configured castanospermine and an amino-australine analogue [Amycolatopsis orientalis],2X05_B Inhibition of the exo-beta-D-glucosaminidase CsxA by a glucosamine- configured castanospermine and an amino-australine analogue [Amycolatopsis orientalis],2X09_A Inhibition of the exo-beta-D-glucosaminidase CsxA by a glucosamine- configured castanospermine and an amino-australine analogue [Amycolatopsis orientalis],2X09_B Inhibition of the exo-beta-D-glucosaminidase CsxA by a glucosamine- configured castanospermine and an amino-australine analogue [Amycolatopsis orientalis]
2VZU_A 1.12e-53 55 736 71 719
Complexof Amycolatopsis orientalis exo-chitosanase CsxA D469A with PNP-beta-D-glucosamine [Amycolatopsis orientalis],2VZU_B Complex of Amycolatopsis orientalis exo-chitosanase CsxA D469A with PNP-beta-D-glucosamine [Amycolatopsis orientalis]
5N6U_A 6.08e-46 67 740 45 702
Crystalstructure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12],5N6U_B Crystal structure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12],5N6U_C Crystal structure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12],5N6U_D Crystal structure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits      download full data without filtering help

Created with Snap5110215420525730836041146351456561766872077182387492697739726sp|Q5H7P5|EBM_LILLO49726sp|Q75W54|EBM_ARATH55748sp|Q82NR8|EBDG_STRAW55736sp|Q56F26|EBDG_AMYOR39730sp|Q4R1C4|EBDG_HYPJE
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5H7P5 1.08e-84 39 726 10 727
Mannosylglycoprotein endo-beta-mannosidase OS=Lilium longiflorum OX=4690 GN=EBM PE=1 SV=4
Q75W54 1.99e-79 49 726 22 723
Mannosylglycoprotein endo-beta-mannosidase OS=Arabidopsis thaliana OX=3702 GN=EBM PE=1 SV=3
Q82NR8 5.51e-59 55 748 72 729
Exo-beta-D-glucosaminidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=csxA PE=1 SV=1
Q56F26 2.61e-53 55 736 71 719
Exo-beta-D-glucosaminidase OS=Amycolatopsis orientalis OX=31958 GN=csxA PE=1 SV=2
Q4R1C4 1.16e-52 39 730 38 713
Exo-beta-D-glucosaminidase OS=Hypocrea jecorina OX=51453 GN=gls93 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000002 0.001605 0.998464 0.000001 0.000001 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000013_02972.