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CAZyme Information: MGYG000000017_00606

You are here: Home > Sequence: MGYG000000017_00606

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp902362275
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp902362275
CAZyme ID MGYG000000017_00606
CAZy Family GH2
CAZyme Description Evolved beta-galactosidase subunit alpha
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1002 MGYG000000017_2|CGC1 112261.95 4.4238
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000017 2173090 Isolate United Kingdom Europe
Gene Location Start: 214187;  End: 217195  Strand: +

Full Sequence      Download help

MDAINDWENQ  ALTHRNRLAP  HAYFMGYETA  DLAATYSREL  SRGFVQLSGS  WQFRLFEGPA60
AVSNEELSTY  KPEWDRVEVP  HLWQVDGYGN  LAYTDEGFPF  PVDQPFVPSD  DPTGVYQRIV120
NLPAVPAGAR  EIIRFDGIES  YGELYVNGKF  IGMTKGSRLS  AEFDVTDALV  EGDNLFAVKV180
LQYSDGSYIE  DQDMWWASGI  FRDVYLMQHP  AAHLVDFRFR  THREGDAAQI  TLDTVAEGAS240
RVVYTLSDGE  NVVATGECVD  GHAECSVADA  HFWNPEDPFL  YDLTFEVYDG  DEVSEYVPHR300
QGLAEVTVEG  NHIYLNGTYF  KMHGVNRHDH  DDHKGRAVGL  DRMRRDLELM  KRHNINAVRT360
SHYANDPRFY  ELCDEYGIML  VAETDMESHG  FENIGNIALV  TDDPAWEPAY  VDRIERLVMQ420
ERNHACIIMW  SMGNESGYGC  NIRAMYARAH  ELDDRPVHYE  EDRNADTVDV  ISTMYSRVSQ480
MNDFGEHPFP  KPRINCEYGH  SMGNGPGGLS  EYQEVFDRWD  CIQGQFIWEW  CDHGLAAVTG540
DGVAYDMYGG  DNGDYPNNSN  FCIDGMVFPW  QQPSPGLTEY  GQVICPVRMA  YDAEAGELTV600
TNKRWFTTLE  DVCLSAETLV  DGDVVCRKTF  MPGAVAPGES  VQLPLVIREA  AVGETLLTVR660
AYTMAAHAWC  EPMFQLGASQ  FAIANHPAPA  IAAPTRPELT  VEETEQEIRI  HSLNGELTFS720
KVNGTVSEWK  ASGRDVMTSG  PQVGFWHPLV  DNHAQEYDSL  WKDNFIDVMQ  TSTRKVSWKQ780
DGNAVVVTVS  QRIAPPVRAF  GMRVELVYTV  LPSGRVDLKV  SGEPYGDYSD  IIPRIGISFE840
VPGCDRAVEW  YGHGPGENYP  DSLRANPVGH  YRTTVDDMFT  PYVMPQDCAN  REGTRWVALR900
SSHGDGVLVT  RPADAASNPF  SFSAWPYSCE  AIDNAKHVYD  LVKGDTVTVN  INDQLLGLGS960
NSWGSEVLDS  YRTRFESFSF  EVSLRPLTSA  DLAQALAPIK  EV1002

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap5010015020025030035040045050155160165170175180185190195134866GH2
Family Start End Evalue family coverage
GH2 34 866 1.8e-197 0.9707446808510638

CDD Domains      download full data without filtering help

Created with Snap501001502002503003504004505015516016517017518018519019515986lacZ4997ebgA33866LacZ306587Glyco_hydro_2_C714984Bgal_small_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 0.0 5 986 15 1026
beta-galactosidase.
PRK10340 ebgA 0.0 4 997 1 1011
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 3.03e-163 33 866 1 804
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 1.03e-111 306 587 1 300
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038 Bgal_small_N 3.50e-88 714 984 4 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits      help

Created with Snap5010015020025030035040045050155160165170175180185190195111001AZH69018.1|GH211001BAQ31796.1|GH211001QOL34338.1|GH26987VEP40598.1|GH26987AQX16063.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
AZH69018.1 0.0 1 1001 1 1001
BAQ31796.1 0.0 1 1001 1 1002
QOL34338.1 0.0 1 1001 1 1004
VEP40598.1 0.0 6 987 6 1004
AQX16063.1 0.0 6 987 6 1004

PDB Hits      download full data without filtering help

Created with Snap50100150200250300350400450501551601651701751801851901951610016S6Z_A610016SD0_A459861YQ2_A99843OB8_A459856ETZ_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 1.12e-164 6 1001 3 996
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 1.15e-164 6 1001 4 997
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
1YQ2_A 4.86e-160 45 986 34 1023
ChainA, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_B Chain B, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_C Chain C, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_D Chain D, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_E Chain E, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_F Chain F, beta-galactosidase [Arthrobacter sp. C2-2]
3OB8_A 2.61e-157 9 984 18 1029
Structureof the beta-galactosidase from Kluyveromyces lactis in complex with galactose [Kluyveromyces lactis],3OB8_B Structure of the beta-galactosidase from Kluyveromyces lactis in complex with galactose [Kluyveromyces lactis],3OB8_C Structure of the beta-galactosidase from Kluyveromyces lactis in complex with galactose [Kluyveromyces lactis],3OB8_D Structure of the beta-galactosidase from Kluyveromyces lactis in complex with galactose [Kluyveromyces lactis],3OBA_A Structure of the beta-galactosidase from Kluyveromyces lactis [Kluyveromyces lactis],3OBA_B Structure of the beta-galactosidase from Kluyveromyces lactis [Kluyveromyces lactis],3OBA_C Structure of the beta-galactosidase from Kluyveromyces lactis [Kluyveromyces lactis],3OBA_D Structure of the beta-galactosidase from Kluyveromyces lactis [Kluyveromyces lactis]
6ETZ_A 7.51e-155 45 985 37 986
Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB [Arthrobacter sp. 32cB],6H1P_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB - data collected at room temperature [Arthrobacter sp. 32cB]

Swiss-Prot Hits      download full data without filtering help

Created with Snap501001502002503003504004505015516016517017518018519019514997sp|P06864|BGA2_ECOLI61001sp|Q56307|BGAL_THEMA6990sp|A5F5U6|BGAL_VIBC39984sp|P00723|BGAL_KLULA6986sp|Q8D4H3|BGAL_VIBVU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P06864 0.0 4 997 1 1011
Evolved beta-galactosidase subunit alpha OS=Escherichia coli (strain K12) OX=83333 GN=ebgA PE=1 SV=4
Q56307 6.29e-164 6 1001 4 997
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
A5F5U6 6.88e-160 6 990 12 1022
Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2
P00723 1.20e-156 9 984 11 1022
Beta-galactosidase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=LAC4 PE=1 SV=2
Q8D4H3 4.69e-153 6 986 12 1029
Beta-galactosidase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=lacZ PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000063 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000017_00606.