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CAZyme Information: MGYG000000054_00009

You are here: Home > Sequence: MGYG000000054_00009

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides acidifaciens
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides acidifaciens
CAZyme ID MGYG000000054_00009
CAZy Family GH2
CAZyme Description Evolved beta-galactosidase subunit alpha
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1113 MGYG000000054_1|CGC1 126626.86 6.6658
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000054 5213730 Isolate United Kingdom Europe
Gene Location Start: 13844;  End: 17185  Strand: +

Full Sequence      Download help

MGIFSLVTTN  TIADNAQKPY  WQDMQVVAVN  KEYPRSSFMT  YDNRNDAMSG  KFERSKYYRL60
LNGTWKFYFA  DSYKDLPDNI  TDPNTSTDSW  YDIQVPGNWE  VQGHGVAIYT  NHGYEFKARN120
PQPPILPEAN  PVGVYRRDID  IPADWDGRDI  YLHLAGAKSG  VYVYINGKEV  GYSEDSKNPA180
EFLINPYVKP  GKNVLTLKIF  RWSTGSYLEC  QDFWRISGIE  RDVFVYSQPK  AALKDFRVTS240
TLDDSYKNGI  FDLNVDLRNH  KKEAANLTLV  YELLDAQGKV  IATEEKTAYI  PTDEVRTLSF300
DKKLADVNTW  TSEHPNLYKL  LMTVKENGKV  KEIIPFNVGF  RRIEIKPIEQ  KAANGKPYVC360
LFINGQPLKL  KGVNIHEHNP  ATGHYVTEEL  MRRDFELMKQ  HNLNSVRLCH  YPQDRRFYEL420
CDEYGLYVYD  EANIESHGMY  YDLRKGGSLG  NNPEWLKLHM  DRTINMFERN  KNYPSVTFWS480
LGNEAGNGYN  FYQTYLWLKE  ADKNIMARPV  NYERAQWEWN  TDMYVPQYPG  ADWLENIGKN540
GSDRPIAPSE  YAHAMGNSTG  NLWGQWQAIY  KYPNLQGGYI  WDWVDQGILQ  KDKNGREYWA600
YGGDFGVNMP  SDGNFLCNGL  VNPDRGPHPA  MAEVKYVHQN  VGFEATDAAS  GKFKITNRFY660
FTNLKKYQIH  YNVVANGKNI  RGGKVSLDIA  PQASKEFAVP  INGLKAQPGT  EYFVNFSVTT720
TEPEPLIPVG  YEIAYDQFQL  PIHAEKGTYK  VSGPALNTST  QGDELIASSS  KVNFVFNKKS780
GLVTSYKVDG  TEYFKDGFGI  QPNFWRAPND  NDYGNGAPKR  LQVWKQSSKN  FHVTDASMTT840
ENKVVSLKVT  YLLAAGNLYV  VTYKIYPSGA  VNVNATFTST  DMQAAETEVS  EATRMATFTP900
GSGAARKAAS  KLEVPRIGVR  FRLPAKMNNV  QYFGRGPEEN  YIDRNHGTLV  GVYKTTADKM960
YFNYVRPQEN  GHHTDTRWIA  LSPDKGSGLA  IVADSLVGFN  ALRNSIEDFD  SEEALPHPYQ1020
WNNFSPEEVA  NHDEQAARNV  LRRMHHVNDI  TPRDFVEVCV  DMKQQGVGGY  DSWGAHPEPF1080
HQIPANREYN  WGFTLVPVRS  AGQANEAAKY  EYQ1113

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap551111662222783333894455005566126677237798348909461001105746949GH2
Family Start End Evalue family coverage
GH2 46 949 9.1e-211 0.9747340425531915

CDD Domains      download full data without filtering help

Created with Snap5511116622227833338944550055661266772377983489094610011057211095lacZ211112ebgA61944LacZ7681095Bgal_small_N361643Glyco_hydro_2_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 0.0 21 1095 17 1024
beta-galactosidase.
PRK10340 ebgA 0.0 21 1112 4 1015
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 8.88e-147 61 944 15 800
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
smart01038 Bgal_small_N 1.40e-102 768 1095 1 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.
pfam02836 Glyco_hydro_2_C 6.52e-90 361 643 8 302
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Created with Snap551111662222783333894455005566126677237798348909461001105711113CBK68335.1|GH211113QUT33020.1|GH2121113QUR46524.1|GH211113SCV08523.1|GH211113QRQ55912.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
CBK68335.1 0.0 1 1113 1 1113
QUT33020.1 0.0 1 1113 1 1113
QUR46524.1 0.0 12 1113 1 1102
SCV08523.1 0.0 1 1113 15 1127
QRQ55912.1 0.0 1 1113 15 1127

PDB Hits      download full data without filtering help

Created with Snap55111166222278333389445500556612667723779834890946100110571910956S6Z_A1910956SD0_A1710993DEC_A1910993BGA_A99881F4A_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 3.81e-235 19 1095 1 979
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 3.93e-235 19 1095 2 980
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 1.12e-219 17 1099 3 998
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 3.82e-213 19 1099 8 1002
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
1F4A_A 6.09e-142 9 988 2 951
E.COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_B E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_C E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_D E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4H_A E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_B E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_C E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_D E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Created with Snap5511116622227833338944550055661266772377983489094610011057191095sp|Q56307|BGAL_THEMA191098sp|O52847|BGAL_PRIM3211103sp|A5F5U6|BGAL_VIBC3221095sp|Q9K9C6|BGAL_ALKHC121097sp|Q6LL68|BGAL_PHOPR
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 2.15e-234 19 1095 2 980
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 1.95e-213 19 1098 18 1034
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
A5F5U6 1.35e-173 21 1103 13 1024
Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2
Q9K9C6 8.32e-167 22 1095 11 1011
Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1
Q6LL68 4.90e-166 12 1097 3 1027
Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.945491 0.052967 0.000831 0.000202 0.000105 0.000406

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000054_00009.