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CAZyme Information: MGYG000000278_00016

You are here: Home > Sequence: MGYG000000278_00016

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA3402 sp003478355
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA3402; UBA3402 sp003478355
CAZyme ID MGYG000000278_00016
CAZy Family GH2
CAZyme Description Beta-galactosidase large subunit
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
685 MGYG000000278_1|CGC1 79136.88 4.9109
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000278 4338723 Isolate China Asia
Gene Location Start: 10693;  End: 12750  Strand: +

Full Sequence      Download help

MSNSYSLQVA  ADFADSEYEE  NMSIHIFILE  EGECQMALEN  KKLDKEEKTP  DLAWLDDPEV60
FRVGQIKAHS  DHHFFDGEET  YQKQEESLCQ  CLNGTWQFAW  SKNPAGRPAD  FYREDADVSG120
FGTIQVPGHM  ELAGFDRIHY  INTMYPWEGH  EYRRPAKTRF  GEQKGQFSEA  EYNPVGSYRC180
VFDLKPALRN  RRVCISFEGV  EKAMYVWLNG  HFVGYAEDSF  TPSDFDLTPW  IREKGNVLAV240
EVYKHSTASY  LEDQDFFRFS  GIFRNVVLYA  KPELHVEDLW  AKPVLETDGK  TGSFSMELTV300
SARDTAADKT  GQLGSVSWRI  VKKGTDDIRG  AGTVLIEGGK  EIHIQIPSQI  IPDVRPWSHE360
DPFLYLLEIR  VKNVRGEIVE  IVPYEIGFRR  IAMDHGIMTL  NGKRLILHGV  NRHEWSAEGG420
RVITEAQMRW  DMDCFHAHNI  DSVRTCHYPD  QIPWYYLCDR  EGIYVMAETN  LESHGSWQKM480
GAVEPSWNVP  GCAKAWEAAV  VDRARTNFEL  LKNHPSILFW  SLGNESYAGD  GIRAMQQMLE540
EKQDGRLIHY  EGVFHNRTYE  KEISHMESQM  YTPPARIEKW  LENNEDKPFI  LCEYMHDMGN600
SLGGMKSYMD  LLEKYDRFQG  GFIWDFIDQA  LWVEDEVTGR  RVLRYGGDFD  DRPSDYAFSG660
DGIVFADRTV  KPAIQEVKYY  YGTYK685

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap346810213717120523927430834237641144547951354858261665068681GH2
Family Start End Evalue family coverage
GH2 68 681 1.2e-141 0.6356382978723404

CDD Domains      download full data without filtering help

Created with Snap346810213717120523927430834237641144547951354858261665074678ebgA58679lacZ391682Glyco_hydro_2_C80685LacZ92272Glyco_hydro_2_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 2.66e-153 74 678 24 596
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 1.02e-140 58 679 20 623
beta-galactosidase.
pfam02836 Glyco_hydro_2_C 5.31e-122 391 682 1 298
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
COG3250 LacZ 1.83e-119 80 685 3 557
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02837 Glyco_hydro_2_N 2.03e-29 92 272 4 169
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Created with Snap346810213717120523927430834237641144547951354858261665051683QNM02889.1|GH252685QEH67710.1|GH252685ADZ82001.1|GH251685ABX42393.1|GH251685QUO31549.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QNM02889.1 2.70e-294 51 683 4 634
QEH67710.1 3.69e-291 52 685 5 626
ADZ82001.1 2.83e-288 52 685 5 626
ABX42393.1 1.91e-287 51 685 4 639
QUO31549.1 1.53e-281 51 685 4 639

PDB Hits      download full data without filtering help

Created with Snap3468102137171205239274308342376411445479513548582616650566856S6Z_A566856SD0_A926853DEC_A566791JZ7_A566791F4A_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 3.02e-121 56 685 5 597
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 3.08e-121 56 685 6 598
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 7.12e-106 92 685 47 617
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
1JZ7_A 4.13e-103 56 679 17 622
E.COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_B E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_C E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_D E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],4TTG_A Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_B Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_C Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_D Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli]
1F4A_A 7.73e-103 56 679 15 620
E.COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_B E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_C E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_D E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4H_A E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_B E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_C E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_D E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Created with Snap346810213717120523927430834237641144547951354858261665050685sp|Q48846|BGAL_LATSK52685sp|Q02603|BGAL_LEULA52685sp|O07684|BGAL_LACAC52685sp|Q7WTB4|BGAL_LACHE50685sp|P24131|BGAL_CLOAT
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q48846 1.40e-262 50 685 3 625
Beta-galactosidase large subunit OS=Latilactobacillus sakei OX=1599 GN=lacL PE=3 SV=1
Q02603 2.21e-259 52 685 5 626
Beta-galactosidase large subunit OS=Leuconostoc lactis OX=1246 GN=lacL PE=1 SV=1
O07684 4.19e-255 52 685 5 628
Beta-galactosidase large subunit OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) OX=272621 GN=lacL PE=3 SV=2
Q7WTB4 1.12e-252 52 685 5 628
Beta-galactosidase large subunit OS=Lactobacillus helveticus OX=1587 GN=lacL PE=2 SV=1
P24131 1.00e-210 50 685 6 616
Beta-galactosidase OS=Clostridium acetobutylicum OX=1488 GN=cbgA PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000058 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000278_00016.