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CAZyme Information: MGYG000000303_00261

You are here: Home > Sequence: MGYG000000303_00261

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Varibaculum cambriense_A
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Varibaculum; Varibaculum cambriense_A
CAZyme ID MGYG000000303_00261
CAZy Family GH2
CAZyme Description Evolved beta-galactosidase subunit alpha
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1021 MGYG000000303_2|CGC2 116446.95 4.7097
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000303 2213433 MAG Sweden Europe
Gene Location Start: 77307;  End: 80372  Strand: +

Full Sequence      Download help

MQLEIHHQDL  QVLHENTLPA  RAYYIPFSPL  QAAKEKNRGR  NFNLEREASD  RFQLLNGDWD60
FGYYPNLEAV  PADFFACERV  ALPGRIPVPG  SWQHHGYDQY  QYTNINYPFP  FDPPHVPYNN120
PAGAYRHTFN  YEKDSQAPEA  TLIFEGVDSC  FYLWINGQYV  GYSQVTHSQS  TFDITEYLKE180
GENILAVLVF  KWSDGSYLED  QDKFRTSGII  RDVYLLKRPL  SHLNDYFVTT  DLQDGRAEVT240
LRANFTGEAL  DITARLCDPE  GEIATSVLEP  FADPQGIYTH  CASFSVDNPR  LWHPGDPYLY300
DLVMVSEGEV  IAEKVGVRQV  TIEDAVLKFN  GSPLKIKGVN  RHDSDPDSGP  VVSIEHIKRD360
LRMMRRHNIN  AVRTSHYPNC  PQFYHLCDQA  GFYVMSEADN  ESHGTRNRLL  QDESEENIEE420
HWNHPISNNP  DWIEPTMNRM  QLCVHSEKNR  PSVFSWSAGN  ECAYGCTFEE  SLAWVKQFDP480
SRVTQYESAF  YRSSDRKYDY  QNIDLYSRMY  PPLSDIDDYL  ENLGDKPFLL  VEYCHAMGNG540
PGDLEEFWDK  VRSDARMCGG  FIWEWCDHAV  RDSNGHLLYG  GDSGEDPHDG  NFCVDGLVSP600
ERVPHIGLLE  AKNVYRPLRC  QYDQEGGKLL  VNNTADHLNA  ADFTSLRWVK  VVDGQEESGT660
LEVPNLPAHE  TVEIPLQLEV  PAEGRCYLRV  EAYLTQPLAF  LESGDLLGFD  EFALKNQSPH720
TPRALELVKA  VTTVEGEGAA  TITEDPLEIC  VVSADYTYHF  SRHTGMLTGI  ELGGKELLKQ780
PAELNIWRAP  TDNDMYIRAL  WERARYDRAY  PHAYEVHVNS  ESQGAVISAK  VALVAKTLQP840
LLKADIEWII  RPDGTLQVNA  KVCRDTQFPE  LPRLGLRFFL  DKSLQQATWA  GLGPHESYID900
KRRSSWHGRF  ESSVSDLFQN  YLRPQENGSR  SDCDYLCLAG  KDLKIEVVSE  DVFSFNASYY960
CQEELTTKPH  DYQLTEADST  ILCLDHLMAG  IGSQSCGPKL  QEKYRLDFET  TQFSFTIRLS1020
N1021

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap5110215320425530635740845951056161266371476581686791896933906GH2
Family Start End Evalue family coverage
GH2 33 906 8.4e-198 0.9840425531914894

CDD Domains      download full data without filtering help

Created with Snap5110215320425530635740845951056161266371476581686791896981019lacZ111021ebgA52912LacZ7531017Bgal_small_N7531017Bgal_small_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 0.0 8 1019 18 1026
beta-galactosidase.
PRK10340 ebgA 0.0 11 1021 8 1001
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 2.14e-130 52 912 12 808
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
smart01038 Bgal_small_N 6.38e-85 753 1017 2 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.
pfam02929 Bgal_small_N 8.14e-81 753 1017 2 230
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits      help

Created with Snap5110215320425530635740845951056161266371476581686791896911021QQT12703.1|GH211021QQU08949.1|GH211021ADI67304.1|GH261007VEH88741.1|GH261017QMS57268.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QQT12703.1 0.0 1 1021 1 1019
QQU08949.1 0.0 1 1021 1 1019
ADI67304.1 0.0 1 1021 1 1019
VEH88741.1 0.0 6 1007 6 1006
QMS57268.1 0.0 6 1017 6 1016

PDB Hits      download full data without filtering help

Created with Snap511021532042553063574084595105616126637147658168679189691110206S6Z_A1110206SD0_A2210061PX3_A2210063MUY_12210064DUV_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 1.52e-177 11 1020 8 982
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 1.57e-177 11 1020 9 983
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
1PX3_A 4.01e-160 22 1006 28 1009
ChainA, beta-galactosidase [Escherichia coli],1PX3_B Chain B, beta-galactosidase [Escherichia coli],1PX3_C Chain C, beta-galactosidase [Escherichia coli],1PX3_D Chain D, beta-galactosidase [Escherichia coli],1PX4_A Chain A, beta-galactosidase [Escherichia coli],1PX4_B Chain B, beta-galactosidase [Escherichia coli],1PX4_C Chain C, beta-galactosidase [Escherichia coli],1PX4_D Chain D, beta-galactosidase [Escherichia coli]
3MUY_1 5.62e-160 22 1006 28 1009
Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]
4DUV_A 8.36e-160 22 1006 57 1038
E.coli (lacZ) beta-galactosidase (G974A) 2-deoxy-galactosyl-enzyme and bis-Tris complex [Escherichia coli K-12],4DUV_B E. coli (lacZ) beta-galactosidase (G974A) 2-deoxy-galactosyl-enzyme and bis-Tris complex [Escherichia coli K-12],4DUV_C E. coli (lacZ) beta-galactosidase (G974A) 2-deoxy-galactosyl-enzyme and bis-Tris complex [Escherichia coli K-12],4DUV_D E. coli (lacZ) beta-galactosidase (G974A) 2-deoxy-galactosyl-enzyme and bis-Tris complex [Escherichia coli K-12],4DUW_A E. coli (lacZ) beta-galactosidase (G974A) in complex with allolactose [Escherichia coli K-12],4DUW_B E. coli (lacZ) beta-galactosidase (G974A) in complex with allolactose [Escherichia coli K-12],4DUW_C E. coli (lacZ) beta-galactosidase (G974A) in complex with allolactose [Escherichia coli K-12],4DUW_D E. coli (lacZ) beta-galactosidase (G974A) in complex with allolactose [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Created with Snap5110215320425530635740845951056161266371476581686791896911006sp|P70753|BGAL_ACTPL71018sp|O33815|BGAL_STAXY111020sp|Q56307|BGAL_THEMA81017sp|P06864|BGA2_ECOLI221006sp|A7ZI91|BGAL_ECO24
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P70753 1.17e-271 1 1006 1 986
Beta-galactosidase OS=Actinobacillus pleuropneumoniae OX=715 GN=lacZ PE=3 SV=1
O33815 9.07e-223 7 1018 7 992
Beta-galactosidase OS=Staphylococcus xylosus OX=1288 GN=lacZ PE=3 SV=1
Q56307 8.57e-177 11 1020 9 983
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
P06864 3.98e-168 8 1017 5 997
Evolved beta-galactosidase subunit alpha OS=Escherichia coli (strain K12) OX=83333 GN=ebgA PE=1 SV=4
A7ZI91 2.25e-159 22 1006 29 1010
Beta-galactosidase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) OX=331111 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000051 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000303_00261.