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CAZyme Information: MGYG000001963_00078

You are here: Home > Sequence: MGYG000001963_00078

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp000434735
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000434735
CAZyme ID MGYG000001963_00078
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1078 MGYG000001963_1|CGC3 123069.02 6.7187
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001963 3288738 MAG Denmark Europe
Gene Location Start: 97805;  End: 101041  Strand: -

Full Sequence      Download help

MNNKLKFTLF  ALCAPWMAMY  AQYNGEPMQK  PQEQAKQQQQ  QVVQRNKYPH  SDNDWENFNV60
LHINRLPSAA  TFLGYPTREL  AREDNKAKSP  WFLSLNGTWK  FKYVGRYDQR  PMDFWKTGFD120
LSSWNDIPVP  SNWEMEGYGY  PFYVGSGYGI  KKNPPLIAVE  NSPVGSYKRT  FTIPADWKGK180
QIVVYFGSVA  SSFYVWVNGK  QVGYSQDSKT  PAEFDITPYV  KAGENEISVQ  VFKFSDGYYL240
EDQDFWRLAG  IQRDVYVYAR  PKVHVRDFEV  VTDLDRTYTD  ADFHLYVELG  KAGGGKISGA300
EVEAELQDAQ  GKTVYKETKR  WNPKEDVMHF  MRHVEKPLLW  SAEIPNLYRL  QIALRVGGKV360
QQYITRKIGF  RECETRHAQL  LVNGKPIYIK  GVNRHEHDPY  KGHVVDEASM  IQDIKLMKEL420
NINCVRTSHY  PNDPRWYELC  DEYGLYVVDE  ANIESHGMGY  DPNKCLANQP  EWEPAFIDRT480
ERMFERDKNH  PSVIIWSLGN  ETGEGCNFAA  TYRWVHANDR  SQRPVHSEDG  IKGPFTDIFC540
PMYKKIDVLI  NHTLYLPNKP  LILCEYAHAM  GNSIGNLQDY  WDVIEKYPSL  QGGHIWDWVD600
QGFATKTADG  KPFMAYGGDL  APKGVPSSAN  FCMNGIIAAD  RTLKPHAHEV  KRVYQNIAFR660
LADYHEGLVE  LQNKYFFKDL  KDFNFYWKLE  GNGEELAKGQ  IENVALAPQQ  KAIFRTSFPK720
VTPAPGVEYF  VRFYACLKND  EGLLKANTEL  ADAQAELPFY  QPLQAAKQAG  KVDMKQTAER780
LSLSANGSEV  EFDKANGALC  SWKQAGKEWI  KSPLLPNFWR  PVTDNDMGNG  MNYTLRAWRE840
AGKNARLEEM  THHALNEGGY  EVVSTYRLDS  VAGSTFKITY  RMQFRGCLDV  ECLFIPANDT900
LPLMPRMGVS  VGLAREASQM  SWLGRGPHEN  YCDRNTSAYV  GLYHGAVKDE  CYLYDRPQEN960
GNKTDVRWMS  LTDAQGAGLM  AIGQPFLSTS  AWPYDPASLD  EPGLRKSQRH  QSDVRESDVI1020
TWNLDLKQMG  VGGDTSWGAF  PHQQYLIPAE  RQSFSFRLCP  ARSADGAAEG  KQYLNMKP1078

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap53107161215269323377431485539592646700754808862916970102482940GH2
Family Start End Evalue family coverage
GH2 82 940 5.3e-233 0.973404255319149

CDD Domains      download full data without filtering help

Created with Snap53107161215269323377431485539592646700754808862916970102492938LacZ531061lacZ531060ebgA374659Glyco_hydro_2_C7841058Bgal_small_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 0.0 92 938 12 804
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK09525 lacZ 0.0 53 1061 15 1027
beta-galactosidase.
PRK10340 ebgA 0.0 53 1060 2 999
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02836 Glyco_hydro_2_C 1.46e-110 374 659 2 302
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038 Bgal_small_N 2.58e-108 784 1058 1 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits      help

Created with Snap531071612152693233774314855395926467007548088629169701024211077ALA72330.1|GH2211077AII66503.1|GH2211077AII65460.1|GH2211077QQY42953.1|GH2211077QUT56704.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
ALA72330.1 0.0 21 1077 23 1076
AII66503.1 0.0 21 1077 22 1075
AII65460.1 0.0 21 1077 22 1075
QQY42953.1 0.0 21 1077 23 1076
QUT56704.1 0.0 21 1077 22 1075

PDB Hits      download full data without filtering help

Created with Snap5310716121526932337743148553959264670075480886291697010245410586S6Z_A5410586SD0_A5410623DEC_A5410623BGA_A5410593MUY_1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 5.26e-278 54 1058 3 979
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 5.43e-278 54 1058 4 980
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 2.01e-233 54 1062 6 998
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 5.30e-230 54 1062 9 1002
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
3MUY_1 4.87e-196 54 1059 15 1021
Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Created with Snap531071612152693233774314855395926467007548088629169701024541058sp|Q56307|BGAL_THEMA461051sp|O52847|BGAL_PRIM3501051sp|Q9K9C6|BGAL_ALKHC541056sp|A3FEW8|BGAL_ENTAG541058sp|P81650|BGAL_PSEHA
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 2.97e-277 54 1058 4 980
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 3.03e-245 46 1051 15 1023
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q9K9C6 5.66e-210 50 1051 4 1003
Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1
A3FEW8 1.45e-207 54 1056 17 1023
Beta-galactosidase OS=Enterobacter agglomerans OX=549 GN=lacZ PE=1 SV=2
P81650 3.10e-206 54 1058 12 1033
Beta-galactosidase OS=Pseudoalteromonas haloplanktis OX=228 GN=lacZ PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.106053 0.854702 0.037685 0.000564 0.000446 0.000524

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001963_00078.