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CAZyme Information: MGYG000002438_00344

You are here: Home > Sequence: MGYG000002438_00344

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides distasonis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides distasonis
CAZyme ID MGYG000002438_00344
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1112 MGYG000002438_1|CGC3 126333.66 6.1812
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002438 5030699 Isolate South Korea Asia
Gene Location Start: 369976;  End: 373314  Strand: +

Full Sequence      Download help

MNSIKKMMLS  GALGCLISGM  AYADGSSPQP  VKPYWQDIQV  VAVNKEKPRS  SFMSYADRET60
ALTSRFEKSP  YYSLLNGTWK  FFFVDSYKDL  PQNITDPSVN  TSSWDDITVP  GNWEVQGHGV120
AIYTNHGYEF  KPRNPQPPLL  PEANPVGVYR  RDIEIPASWD  NRDIYLHIGG  AKSGLYVYLN180
GKEVGYSEDS  KNPAEFLINK  YLQPGKNVLT  LKIFRWSTGS  YLECQDFWRM  SGIERDVFLW240
SQPKASIQDF  RVVSTLDDTY  TNGIFKLAVD  LKNHTQETKN  LNVGYELLDA  KGNLVTSEAN300
DIWVSPASPQ  TASFEYDLKN  VAPWSAEHPN  LYKLLMTIKE  EGKVIEVVPF  NVGFRRFEMK360
QIDQVAEDGK  PYTVLLFNGQ  PVKFKGVNIH  EHNPETGHYV  TEELMRKDFE  LMKQNNINAV420
RLCHYPQDRK  FYELCDEYGL  YVYDEANIES  HGMYYSLKKG  GTLGNNPEWL  IPHMDRTMNM480
YERNKNYPSV  TFWSLGNEAG  NGYNFYQTYL  YLKDKEINSM  NRPVNYERAL  WEWNTDMYVP540
QYPSAEWLEE  IGRKGSDRPV  APSEYSHAMG  NSSGNLWDQW  KAIYKYPNLQ  GGFIWDWVDQ600
GILEKDKNGR  EYYTYGGDYG  VNAPSDGNFL  CNGIVNPDRT  PHPAMAEVKY  AHQNIGFEAI660
DLANGLFRVT  NRFYFTNLKK  YMVHYSVTAN  NKVVRSGKVS  LDIEPQASKE  FTVPVGNLKP720
QAGTEYFVNF  NVTTVEKEPL  IPIGHEIACD  QFRLPIESPK  KAFKTSGPKL  TVSTNGDNLS780
ASSSKVNFMF  NKKTGIVTSY  KVDGTEYFSE  GFGIQPNFWR  APTDNDYGNG  MPKRLQVWKE840
SSKNFNVTDA  TVTMDGNNAV  VNVNYLLPAG  NLYIVNYTIY  PSGAVNVAAR  FTSTDMDAAQ900
TEVSESTRTA  TFTPGRDAAR  KEASKLNVPR  IGVRFRLPAS  MNQVEYFGRG  PAENYLDRNA960
GSMVGLYKST  AEELYFPYVR  PQENGHHTDT  RWVSLSTGKK  GLLIQADNTI  GFNALRNSIE1020
DFDDEEATGL  SRQWSNFTPE  QVANHDEAAA  KNVLRRQHHI  NNITPRDFVE  VCVDLKQQGV1080
AGYDSWGSRP  EPAYTLPANR  EYNWGFTLIP  LK1112

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap551111662222783333894445005566116677227788348899451000105661964GH2
Family Start End Evalue family coverage
GH2 61 964 2.9e-209 0.9747340425531915

CDD Domains      download full data without filtering help

Created with Snap5511116622227833338944450055661166772277883488994510001056351108lacZ351111ebgA58958LacZ7821108Bgal_small_N374657Glyco_hydro_2_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 0.0 35 1108 17 1024
beta-galactosidase.
PRK10340 ebgA 0.0 35 1111 4 1000
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 2.34e-140 58 958 3 800
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
smart01038 Bgal_small_N 1.84e-104 782 1108 1 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.
pfam02836 Glyco_hydro_2_C 9.40e-90 374 657 7 302
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Created with Snap551111662222783333894445005566116677227788348899451000105611112QUT19668.1|GH211112QIX66118.1|GH211112BBK89947.1|GH211112QUT53259.1|GH211112ABR42015.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QUT19668.1 0.0 1 1112 1 1112
QIX66118.1 0.0 1 1112 1 1112
BBK89947.1 0.0 1 1112 3 1114
QUT53259.1 0.0 1 1112 1 1112
ABR42015.1 0.0 1 1112 1 1112

PDB Hits      download full data without filtering help

Created with Snap55111166222278333389444500556611667722778834889945100010563311086S6Z_A3311086SD0_A3211123DEC_A2611123BGA_A359913MUY_1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 2.62e-235 33 1108 1 979
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 2.70e-235 33 1108 2 980
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 4.96e-214 32 1112 4 998
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 2.49e-210 26 1112 2 1002
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
3MUY_1 1.10e-144 35 991 16 942
Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Created with Snap5511116622227833338944450055661166772277883488994510001056331108sp|Q56307|BGAL_THEMA261111sp|O52847|BGAL_PRIM3351108sp|A5F5U6|BGAL_VIBC3361108sp|Q9K9C6|BGAL_ALKHC35991sp|A1SWB8|BGAL_PSYIN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 1.48e-234 33 1108 2 980
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 1.35e-220 26 1111 11 1034
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
A5F5U6 8.17e-171 35 1108 13 1016
Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2
Q9K9C6 9.18e-165 36 1108 11 1011
Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1
A1SWB8 3.31e-163 35 991 13 954
Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001309 0.858556 0.139027 0.000467 0.000345 0.000278

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002438_00344.