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CAZyme Information: MGYG000003019_00235

You are here: Home > Sequence: MGYG000003019_00235

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes sp900553175
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp900553175
CAZyme ID MGYG000003019_00235
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1027 MGYG000003019_3|CGC2 115454.69 5.5968
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003019 1454145 MAG China Asia
Gene Location Start: 58483;  End: 61566  Strand: -

Full Sequence      Download help

MKRTLHLLAA  LLLTSAAAAA  PTIPEWQDPT  VNAINRLPMR  ATFAAGERLS  LDGIWKFRWV60
RNAWERPEDF  GRPDCDDRAW  GTIPVPGMWE  MNGYGDPVYV  NTGYAWRGSF  RSEPPRVPEA120
ENHVGSYRRT  FELPASWSGK  DIFLHIGSAT  SNVCVWINGR  FVGYSEDSKL  AASFEVTEFV180
RPGRNLIALQ  IFRWCDGTYL  EDQDFWRMSG  IARGVELTAR  DRAHLCDLHV  TPALDDDHAV240
GRLQVEMTAT  PRVKELRLEL  RDAAGQTVAR  AAAAPVSGQT  GCSLEVENPA  LWSAEEPNLY300
TLSVEVVDRR  DRTAETAETA  VGFRTVEIRG  GRLLVNGAPV  LIKGVNRHEM  DPLGGYVLSR360
ERMMEDIRIM  KELNINAVRT  CHYPDDPFWY  DLCDRYGIYV  FDEADVESHG  MGYGERTLAR420
DPAYARAHLE  RNSRMVARDR  NHPSVIVWSM  GNEAGMGPNF  EACYEWIKAH  DPSRPVHYER480
AFGYRRASDG  KEFTDIACPM  YHDYAWCRRY  CESEPDKPLI  QCEYAHAMGN  SLGGFDTYWE540
LIRRYPCYQG  GFIWDFADQG  LARYESDGRA  SFLYGGDFNG  SDPSDNSFNC  NGIVAADRTW600
HPHAREVQRQ  YQNIWTSLAD  PARGLVEVFN  ENFFSTLDAY  ELEWQLLQDG  LVTRRGRVET660
CDIGPRQRRT  VALGFSEADF  GNEGREVLLN  VAYNLRQPAG  LLPAGLLPAG  FTAARQQLTI720
RTAGRTAGFG  PASKGSVAVV  RRERAVCAEG  DGWHILFGRD  GWVKGYCVRG  QELLLEGSSL780
RPQFWRAPTE  NDLGNGTARR  SAVWKKPLMK  LLSFDASAET  EGMALVEARY  ELPEVGAQLT840
MTYRIDGAGA  MTVTERIAPG  DGAPAPDLLR  FGMRFEMPAR  YDRIVCYGRG  PHENYCDRLT900
SADLGIWQQR  VADQYHDRYV  RPQESGTRSD  LRWWRVEDSA  GAGISIAADA  PFSASALPYL960
TEDLDVTELP  PQQHSGTLVP  RHATCVNIEA  RQAGLGCIDS  WGALPEEEHR  LPYGEYTFRF1020
VLRPGQK1027

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap5110215420525630835941046251356461666771877082187292497544902GH2
Family Start End Evalue family coverage
GH2 44 902 1.2e-216 0.9627659574468085

CDD Domains      download full data without filtering help

Created with Snap51102154205256308359410462513564616667718770821872924975261024lacZ261026ebgA47906LacZ326614Glyco_hydro_2_C7491022Bgal_small_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 0.0 26 1024 17 1026
beta-galactosidase.
PRK10340 ebgA 0.0 26 1026 4 1001
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 4.32e-156 47 906 11 808
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 1.67e-108 326 614 1 300
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038 Bgal_small_N 1.54e-90 749 1022 1 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits      help

Created with Snap5110215420525630835941046251356461666771877082187292497511027BBL01806.1|GH211027BBL09676.1|GH211027BBL12470.1|GH211027AFL76749.1|GH211027BBL06016.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
BBL01806.1 0.0 1 1027 2 1018
BBL09676.1 0.0 1 1027 2 1018
BBL12470.1 0.0 1 1027 2 1018
AFL76749.1 0.0 1 1027 1 1017
BBL06016.1 0.0 1 1027 1 1022

PDB Hits      download full data without filtering help

Created with Snap511021542052563083594104625135646166677187708218729249754710276S6Z_A4710276SD0_A2410243DEC_A2310243BGA_A1210216CVM_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 1.25e-213 47 1027 37 984
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 1.28e-213 47 1027 38 985
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 1.28e-209 24 1024 5 996
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 6.96e-198 23 1024 7 1000
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
6CVM_A 2.12e-184 12 1021 1 1018
Atomicresolution cryo-EM structure of beta-galactosidase [Escherichia coli K-12],6CVM_B Atomic resolution cryo-EM structure of beta-galactosidase [Escherichia coli K-12],6CVM_C Atomic resolution cryo-EM structure of beta-galactosidase [Escherichia coli K-12],6CVM_D Atomic resolution cryo-EM structure of beta-galactosidase [Escherichia coli K-12],6X1Q_A 1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope [Escherichia coli K-12],6X1Q_B 1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope [Escherichia coli K-12],6X1Q_C 1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope [Escherichia coli K-12],6X1Q_D 1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Created with Snap51102154205256308359410462513564616667718770821872924975471027sp|Q56307|BGAL_THEMA181024sp|O52847|BGAL_PRIM3271011sp|Q9K9C6|BGAL_ALKHC111021sp|Q3Z583|BGAL_SHISS251023sp|A0KQH4|BGAL_AERHH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 7.03e-213 47 1027 38 985
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 6.72e-202 18 1024 12 1033
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q9K9C6 9.57e-188 27 1011 11 999
Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1
Q3Z583 1.16e-184 11 1021 2 1020
Beta-galactosidase OS=Shigella sonnei (strain Ss046) OX=300269 GN=lacZ PE=3 SV=1
A0KQH4 1.68e-184 25 1023 10 1025
Beta-galactosidase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000428 0.998816 0.000200 0.000198 0.000176 0.000164

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003019_00235.