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CAZyme Information: MGYG000003482_00110

You are here: Home > Sequence: MGYG000003482_00110

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Selenomonas_C bovis
Lineage Bacteria; Firmicutes_C; Negativicutes; Selenomonadales; Selenomonadaceae; Selenomonas_C; Selenomonas_C bovis
CAZyme ID MGYG000003482_00110
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1044 MGYG000003482_6|CGC1 117615.49 5.275
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003482 2265437 MAG Fiji Oceania
Gene Location Start: 14882;  End: 18016  Strand: +

Full Sequence      Download help

METSFDWGNL  QKPTFFAEHR  LPAYSDHRCY  RDEAELARGE  SSFSLRLDGV  WYFHYARNLP60
LRPEGFEQPD  YDCRGWETIR  VPAHWELEGY  GRPQYTNMTY  PWDGHERVTP  GEIPTRENPV120
GSYVRYFTLP  EGWRGARVRV  TFAGAESALV  VYLNGHYVGY  SEDSFTPASF  DITELLMPGE180
NKLAVSVVRF  SSGSWLEDQD  FWRFGGLFRS  VWLETQPAQH  VEDLFVHAAP  VHGYRDGALR240
IALRWSSEAA  RQVELALYDA  AGTLAARTSE  TQEGTQTELS  LAVSGVRLWS  AEQPYLYRAL300
LTVRDAAGRV  LEVVPQQVGF  REFCLEDGLM  KLNGKRIVFK  GVNRHEFDCD  RGRAIDPASI360
ERDIIEMKRQ  NINAVRTSHY  PNSSRLYELA  DRYGLYVIDE  TNLETHGTWQ  KNGVHVPSDG420
VLPGDHEAWR  AAVLDRAHSM  LARDKNHPSI  LIWSCGNESC  GGRDIYEMSQ  LFRREDPSRL480
VHYESIFWDR  SYPATSDMES  QMYTKVADIR  AFLAAHPEKP  FLCCEYSHAM  GNSLGGMHKY540
TDFADEEPRY  QGGFLWDFVD  QALWRRDRYG  RDSYAYGGDF  GDRPCDYDFS  GDGIFFADRS600
LSPKLQAVKF  NYQDFRLTPS  KKGVTIENRS  LFTDAADYVL  CISLLRDGTP  VYETQCAVPS660
IAPGGTGEVP  LALPACGAGE  YALTASLCLR  ARTLWAEAGY  EIAFGQTVYE  EPEAQGTRQD720
WLAAPAARYE  AGRILPSAHP  LHIVKSDICV  GVSGDGFEVL  FSSAVGNLVS  YKYNGVELID780
GLPRPSFWRA  PVNNDYGSRR  DFLTAQWKLA  SLYQRCERVE  LREPGKDWQT  YQWFGSDGTA840
EYDAAPGETL  AVRFTYALAT  SPQAACRVTY  TVHAGGRVEV  ALDYEKTEGL  PELPDFAVVL900
PLSADYDRVA  FYGLGPAETY  ADRVRGARLG  RYEGRVRDEV  APYLVPQACG  NHMGVRYLAV960
TDRRGRGLKV  FGAQPFEASA  LPYTEHELES  ARHQNELPRV  QHTYLRASLG  SCGVGGDDSW1020
GAPVLEEYTV  KNESKRFVFS  FCGI1044

Enzyme Prediction      help

No EC number prediction in MGYG000003482_00110.

CAZyme Signature Domains help

Created with Snap5210415620826131336541746952257462667873078383588793999131929GH2
Family Start End Evalue family coverage
GH2 31 929 2.3e-212 0.9773936170212766

CDD Domains      download full data without filtering help

Created with Snap5210415620826131336541746952257462667873078383588793999161042lacZ91041ebgA47931LacZ325615Glyco_hydro_2_C7531041Bgal_small_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 0.0 6 1042 16 1025
beta-galactosidase.
PRK10340 ebgA 0.0 9 1041 3 997
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 2.30e-163 47 931 15 808
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 4.47e-116 325 615 3 300
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038 Bgal_small_N 1.29e-89 753 1041 1 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits      help

Created with Snap5210415620826131336541746952257462667873078383588793999131044QNH54447.1|GH221044BAL84141.1|GH231044ANR70851.1|GH231044AKT54154.1|GH231044AOH47419.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QNH54447.1 0.0 3 1044 2 1037
BAL84141.1 0.0 2 1044 3 1047
ANR70851.1 0.0 3 1044 2 1037
AKT54154.1 0.0 3 1044 2 1039
AOH47419.1 0.0 3 1044 2 1042

PDB Hits      download full data without filtering help

Created with Snap521041562082613133654174695225746266787307838358879399914510396S6Z_A4510396SD0_A610421F4A_A610425A1A_A610423MUY_1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 3.27e-180 45 1039 39 977
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 3.36e-180 45 1039 40 978
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
1F4A_A 3.80e-153 6 1042 13 1019
E.COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_B E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_C E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_D E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4H_A E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_B E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_C E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_D E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli]
5A1A_A 3.89e-153 6 1042 14 1020
2.2A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12],5A1A_B 2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12],5A1A_C 2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12],5A1A_D 2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12]
3MUY_1 3.99e-153 6 1042 15 1021
Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Created with Snap5210415620826131336541746952257462667873078383588793999111039sp|Q9K9C6|BGAL_ALKHC101032sp|P23989|BGAL_STRTR61030sp|O52847|BGAL_PRIM34933sp|P24131|BGAL_CLOAT101036sp|Q1G9Z4|BGAL_LACDA
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9K9C6 0.0 1 1039 1 1009
Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1
P23989 7.05e-268 10 1032 11 1012
Beta-galactosidase OS=Streptococcus thermophilus OX=1308 GN=lacZ PE=3 SV=1
O52847 8.24e-263 6 1030 19 1019
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
P24131 4.96e-259 4 933 7 894
Beta-galactosidase OS=Clostridium acetobutylicum OX=1488 GN=cbgA PE=2 SV=2
Q1G9Z4 2.58e-248 10 1036 19 996
Beta-galactosidase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081 / BCRC 10696 / JCM 1002 / NBRC 13953 / NCIMB 11778 / NCTC 12712 / WDCM 00102 / Lb 14) OX=390333 GN=lacZ PE=3 SV=3

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000046 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003482_00110.