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CAZyme Information: MGYG000003542_00034

You are here: Home > Sequence: MGYG000003542_00034

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes sp900769445
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp900769445
CAZyme ID MGYG000003542_00034
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
672 MGYG000003542_6|CGC1 75700.31 6.4242
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003542 1966624 MAG Fiji Oceania
Gene Location Start: 19295;  End: 21313  Strand: +

Full Sequence      Download help

MQYRFLVLPL  LFLLSVVSGG  AAEPSRTRYN  LNGDWRLFDA  TQLDISNADY  IALPHTWQSA60
LGSYGKGGAA  NYIRTLNIPR  EWMGKRLFLR  FGGVQSVAGV  FVNGSFTGAH  KGGFTAFTVE120
ITNAVRYGAE  NFIRVVVSNE  VRSDVLPVSS  DMDLTAGIYR  DVELIVAPRN  MISLEYLGSE180
GVFVVQESVK  REQVAGYVRC  YISAQNLAHL  DLTVRIIGTD  GYEIESHTQR  INKLSDTGYV240
DIPFSVNNPK  LWSPQSPAMY  SFEVSLSDGK  SSDVVTVETG  FRKVAFNADK  RLCINDVPQE300
IRGVNLAHDR  MGYGMAISQS  ALYEDYTILH  DMGANALRSL  SGPHDQSLYD  WCDRDGVLAW360
VDMPFTRSEA  AFADICYYPI  EEFHRNGTDQ  LAEIIAQNYN  HPSVVMWGLF  SLVWQQGDNV420
IDYIKILNDK  AHKLDPTRPT  MGCSNMDGEI  NFITDGVALR  QNVGWQKGMA  EDVAVWCRQL480
ASKREWRTYN  FGVCYGEEGA  SEHNTERIVR  AQRGTRNLPA  RRQTYMHERY  FSIIDTMGDF540
WGMWLNSMFD  YASSRRPYHL  NRSGMVGYDH  STKKDAFYLY  RAVWNDSDPT  LHIAEGDWQS600
RTDTLQHFTV  YSSVGKPLLL  VNGDSVSMRR  TSRGIYRADS  VIIKGHATIE  AVDSTATHRH660
HIEINCGGLL  SL672

Enzyme Prediction      help

No EC number prediction in MGYG000003542_00034.

CAZyme Signature Domains help

Created with Snap336710013416820123526830233636940343647050453757160463822550GH2
Family Start End Evalue family coverage
GH2 22 550 6.2e-88 0.5811170212765957

CDD Domains      download full data without filtering help

Created with Snap336710013416820123526830233636940343647050453757160463821439LacZ24446PRK1015023438ebgA31168Glyco_hydro_2_N23409lacZ
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 9.22e-46 21 439 5 428
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 4.13e-41 24 446 8 450
beta-D-glucuronidase; Provisional
PRK10340 ebgA 1.08e-30 23 438 36 470
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02837 Glyco_hydro_2_N 2.18e-16 31 168 4 169
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK09525 lacZ 1.00e-14 23 409 47 459
beta-galactosidase.

CAZyme Hits      help

Created with Snap336710013416820123526830233636940343647050453757160463814652AFL77609.1|GH211651BBL04059.1|GH211651BBL13451.1|GH221652BBL11991.1|GH221652BBL09199.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
AFL77609.1 3.07e-182 14 652 8 642
BBL04059.1 4.78e-182 11 651 5 644
BBL13451.1 9.56e-182 11 651 5 644
BBL11991.1 2.01e-177 21 652 15 642
BBL09199.1 2.01e-177 21 652 15 642

PDB Hits      download full data without filtering help

Created with Snap3367100134168201235268302336369403436470504537571604638316303CMG_A316305Z1A_A216643FN9_A266326MVG_A316577KGZ_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CMG_A 1.18e-103 31 630 9 616
Crystalstructure of putative beta-galactosidase from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
5Z1A_A 1.64e-103 31 630 28 635
Thecrystal structure of Bacteroides fragilis beta-glucuronidase in complex with uronic isofagomine [Bacteroides fragilis NCTC 9343]
3FN9_A 3.12e-75 21 664 22 661
Crystalstructure of putative beta-galactosidase from bacteroides fragilis [Bacteroides fragilis NCTC 9343],3FN9_B Crystal structure of putative beta-galactosidase from bacteroides fragilis [Bacteroides fragilis NCTC 9343],3FN9_C Crystal structure of putative beta-galactosidase from bacteroides fragilis [Bacteroides fragilis NCTC 9343],3FN9_D Crystal structure of putative beta-galactosidase from bacteroides fragilis [Bacteroides fragilis NCTC 9343]
6MVG_A 5.21e-65 26 632 25 625
Crystalstructure of FMN-binding beta-glucuronidase from Ruminococcus gnavus [[Ruminococcus] gnavus],6MVG_B Crystal structure of FMN-binding beta-glucuronidase from Ruminococcus gnavus [[Ruminococcus] gnavus],6MVG_C Crystal structure of FMN-binding beta-glucuronidase from Ruminococcus gnavus [[Ruminococcus] gnavus]
7KGZ_A 5.21e-65 31 657 7 616
ChainA, Beta-glucuronidase [Roseburia hominis],7KGZ_B Chain B, Beta-glucuronidase [Roseburia hominis]

Swiss-Prot Hits      download full data without filtering help

Created with Snap33671001341682012352683023363694034364705045375716046383659sp|T2KPJ7|PLH8_FORAG30442sp|P77989|BGAL_THEP344442sp|P26257|BGAL_THETU23626sp|T2KM09|PLH16_FORAG24465sp|P05804|BGLR_ECOLI
Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KPJ7 1.01e-48 3 659 26 710
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1
P77989 6.41e-39 30 442 7 414
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
P26257 2.91e-29 44 442 26 415
Beta-galactosidase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=lacZ PE=1 SV=1
T2KM09 1.08e-27 23 626 43 664
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2
P05804 4.17e-27 24 465 8 471
Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000274 0.999053 0.000203 0.000154 0.000147 0.000139

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003542_00034.