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CAZyme Information: MGYG000003569_00236

You are here: Home > Sequence: MGYG000003569_00236

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Treponema_D sp900769975
Lineage Bacteria; Spirochaetota; Spirochaetia; Treponematales; Treponemataceae; Treponema_D; Treponema_D sp900769975
CAZyme ID MGYG000003569_00236
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1213 MGYG000003569_17|CGC1 138264.34 4.9688
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003569 3076540 MAG Fiji Oceania
Gene Location Start: 21834;  End: 25475  Strand: -

Full Sequence      Download help

MEKLFNDNWE  FCEIPLNNDD  MYKDGNPVLF  NPEDFFETAK  NGEYDKVTLP  HDWMIYHVKD60
LYKNSVGCYK  KNFTIGTNTG  SKDNLAVECA  VENPTEQSVE  QFIKESRFAL  RFEGVYMNCA120
VWVNSQKVGE  WKYGYSTFEF  DISKYVKSGE  NEVIVIAVYQ  SPNTRWYSGA  GIFRDVHFIQ180
TQKAFLVSDG  TYFVARPCDE  NNLFGKWSVK  LQAEAAGQIE  NHKIVHTLSD  KAGNVVAVVE240
DCVLEKMNES  DRSYLKENVP  SISDYELFES  KKEIFIEKPD  LWSTKNPELY  IIKTELYDKN300
GQLIDSVSQN  FGFKSFYFDK  DKGFFLNGEH  LKIYGACQHH  DFGGLGSAFN  KNALRRQFMK360
LQEMGINSVR  CSHNPPPKKF  MNLADEMGLL  IDDEAFDMWE  KPKTSFDYGN  YFNEWCEKDT420
VSWVRKDRNH  PCLIMWSIGN  EIYDTHVGNG  YEITKKLKKI  VERNDPYKNA  LITIGSNYMM480
TDGAQHCAEE  IDVVGYNYLE  RLYDEHHEKY  PSWKIYGSET  SSTVQSRGIY  HFPESLKLVT540
FSDGQCSTLG  NCSTPWSAPN  TQTVITKDRD  FDFSAGQYIW  TGWDYIGEPT  PYHTKNSYFG600
QIDTAGFPKD  TFYLYKSEWA  YKNAAPFVHL  LPYWDWNEGQ  IIDVKAYTNA  DAVELFFNGK660
SLGKQAVDHQ  KSQEPFGRWQ  VEYHKGEIKA  IAYDKNGAIV  AEDVKKSFGD  PEKIVLQPEE720
GDFGDLHFID  IMTVDKNNVP  VENARNYITF  NVTGEAELLG  MDNGDSTDYD  EYKTQGRSLT780
RKLFSNRLVA  IVRVKKSASE  KGGIVITAAS  KDLPTVSLKF  DGKKWCETSA  YLAIKPEKDM840
IPARKIEIIA  QGDTKMSPAN  KQINVTCKIL  PENTTFKTIN  WKPVLKECVS  SDYIQVTQKS900
GENSGTETAV  IQAVCDGECI  LRCTAQNGTN  LDEVLSDLNF  SVEGLGNPKL  DPYKMIEACR960
QNSWDKTKQK  PTVCLESGIS  NRGIGPTWIS  FDKVDFGQEG  SDTIHIPIFS  FETEIPIEVW1020
DGTPGDGTTY  EGSVPSQSGE  CLGKFVYKHE  SIYNTYSENV  FVLSKRLFGS  HTVSIVLPRE1080
LYFHGFYFDK  TKKALSKLRA  LDADMIAGDS  YNCTDENVEK  IGNNVCLDFN  NMDFGDAKVK1140
KLTVCGKSNT  ENNTINVKFF  NEDGTNTTQV  IEFPHTDSYE  EREFILDEVT  GKKKVSFVFL1200
PGCNFDFKWF  KFE1213

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap601211812423033634244855456066677277888499099701031109111524646GH2
Family Start End Evalue family coverage
GH2 4 646 7.4e-93 0.6422872340425532

CDD Domains      download full data without filtering help

Created with Snap60121181242303363424485545606667727788849909970103110911152110636LacZ104497PRK101503441ebgA64441lacZ639703DUF4982
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 4.14e-60 110 636 103 615
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 1.09e-35 104 497 80 470
beta-D-glucuronidase; Provisional
PRK10340 ebgA 2.93e-33 3 441 42 449
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 1.20e-26 64 441 119 462
beta-galactosidase.
pfam16355 DUF4982 2.13e-22 639 703 1 62
Domain of unknown function (DUF4982). This family is found in the C-terminal of uncharacterized proteins and beta-galactosidases around 680 residues in length from various Bacteroides species. The function of this protein is unknown.

CAZyme Hits      help

Created with Snap6012118124230336342448554560666772778884990997010311091115211213BCJ94036.1|GH2441212BCJ98579.1|GH211213QNO17150.1|GH241213AGC67981.1|GH2|3.2.1.2341213ANW98383.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
BCJ94036.1 0.0 1 1213 4 1146
BCJ98579.1 0.0 44 1212 30 1135
QNO17150.1 0.0 1 1213 1 1136
AGC67981.1 0.0 4 1213 6 1145
ANW98383.1 0.0 4 1213 6 1145

PDB Hits      download full data without filtering help

Created with Snap6012118124230336342448554560666772778884990997010311091115257964YPJ_A58137CWD_A58244CU6_A58244CUC_A58155T98_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4YPJ_A 1.12e-158 5 796 12 784
ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans]
7CWD_A 2.14e-155 5 813 6 792
ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans]
4CU6_A 3.80e-141 5 824 18 847
Unravellingthe multiple functions of the architecturally intricate Streptococcus pneumoniae beta-galactosidase, BgaA [Streptococcus pneumoniae TIGR4],4CU7_A Unravelling the multiple functions of the architecturally intricate Streptococcus pneumoniae beta-galactosidase, BgaA [Streptococcus pneumoniae TIGR4],4CU8_A Unravelling the multiple functions of the architecturally intricate Streptococcus pneumoniae beta-galactosidase, BgaA [Streptococcus pneumoniae TIGR4]
4CUC_A 1.04e-140 5 824 18 847
Unravellingthe multiple functions of the architecturally intricate Streptococcus pneumoniae beta-galactosidase, BgaA. [Streptococcus pneumoniae TIGR4]
5T98_A 1.68e-133 5 815 30 813
Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis]

Swiss-Prot Hits      download full data without filtering help

Created with Snap6012118124230336342448554560666772778884990997010311091115230824sp|A7LXS9|BGH2A_BACO11809sp|T2KM09|PLH16_FORAG31695sp|T2KPJ7|PLH8_FORAG29760sp|P77989|BGAL_THEP35818sp|T2KN75|PLH17_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7LXS9 1.04e-131 30 824 53 850
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1
T2KM09 5.85e-87 1 809 47 808
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2
T2KPJ7 1.10e-44 31 695 66 705
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1
P77989 4.69e-35 29 760 13 695
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
T2KN75 3.82e-30 5 818 31 791
Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000038 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003569_00236.