logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003883_00398

You are here: Home > Sequence: MGYG000003883_00398

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Kosakonia cowanii
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Kosakonia; Kosakonia cowanii
CAZyme ID MGYG000003883_00398
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
734 MGYG000003883_10|CGC1 83257.11 8.8645
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003883 4218591 MAG United States North America
Gene Location Start: 15439;  End: 17643  Strand: +

Full Sequence      Download help

MMRNALLLSL  LLSTQAFATA  LPVTWSLAGE  WRVHDANDPA  FDGVSASSAD  WRTLRVPANW60
YSDGLDHQGA  LWYRHSFTLP  AQSADTLATL  VFDGVDYLAD  VTLNGKRLAH  HEGYYQRFPV120
DVSQALRRHN  QLTVRVDSPF  EDPKTIWPLH  KTMVKGVLNQ  HDTRPGGAWS  AQGQDANSGG180
IWAPVRLHLS  RGAAIDEVIL  RPQWQQGLTK  PMLRAEIRYR  AKQAGPVTLR  LTAKPDNFYG240
RDYRQEFPVT  LEAGDSKVLT  VTLPMEAARL  WWPVGHGKPN  LYRVRASLID  RQGVMDTAVT300
RTGLRKMEEA  PDNKGWRIND  KRLFVKGSNY  IGSPWLGTMT  RARYRQDFEL  VTRMNANAIR360
VHGHVAGRAL  YDVADEMGLM  IWQDVPLQWG  YNNSSEFADN  AARQTREMVA  QFGNSPAIVA420
WGGHNEPPWN  SPWMEKRFKD  WNKDLNRELT  QKVADALAED  TSRIVHRYSA  VEEHYWQGWY480
FGTMRDVLAP  AKTGIITEFG  AQALPRLSTL  KTIIPASEMW  PKSTDAKDPG  WDRWKYHNFQ540
PFQTFGFANV  PRGENIQQTI  DNTQRYQAEL  VAMAAESYRR  QRYQPVTALF  HFMFVETWPS600
INWGVVDYLR  QPKAGYYALQ  TAYQPLLPSI  EPVTANWQTN  KANILRLWAI  NDSWSACEKC660
TLKWRITQND  NSLESGDLLL  TLDADSGQMV  KEVSVTPTAP  GEARIAYWIE  DQQGKVVGKN720
ARVEVVTAGE  NAAP734

Enzyme Prediction      help

EC 3.2.1.21

CAZyme Signature Domains help

Created with Snap367311014618322025629333036740344047751355058762366069726709GH2
Family Start End Evalue family coverage
GH2 26 709 2.3e-100 0.7087765957446809

CDD Domains      download full data without filtering help

Created with Snap367311014618322025629333036740344047751355058762366069726629LacZ66427PRK1015027466ebgA213305Glyco_hydro_226136Glyco_hydro_2_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 2.84e-44 26 629 14 635
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 1.10e-16 66 427 62 418
beta-D-glucuronidase; Provisional
PRK10340 ebgA 2.05e-11 27 466 44 473
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam00703 Glyco_hydro_2 3.08e-09 213 305 20 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02837 Glyco_hydro_2_N 5.18e-09 26 136 3 133
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Created with Snap36731101461832202562933303674034404775135505876236606971734AST70760.1|GH21734QAR44936.1|GH21728APZ04632.1|GH21728AZI86236.1|GH21734QNQ21798.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
AST70760.1 0.0 1 734 1 734
QAR44936.1 0.0 1 734 1 734
APZ04632.1 0.0 1 728 1 728
AZI86236.1 0.0 1 728 1 728
QNQ21798.1 0.0 1 734 1 734

PDB Hits      download full data without filtering help

Created with Snap3673110146183220256293330367403440477513550587623660697906325N6U_A266256BYE_A266256BYC_A266256BYI_A266256BYG_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5N6U_A 1.51e-32 90 632 102 662
Crystalstructure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12],5N6U_B Crystal structure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12],5N6U_C Crystal structure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12],5N6U_D Crystal structure of Beta-D-Mannosidase from Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12]
6BYE_A 8.62e-32 26 625 7 672
Crystalstructure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri in complex with mannose [Xanthomonas citri pv. citri str. 306],6BYE_B Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri in complex with mannose [Xanthomonas citri pv. citri str. 306]
6BYC_A 8.63e-32 26 625 7 672
Crystalstructure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306]
6BYI_A 2.00e-31 26 625 5 670
Crystalstructure of the acid-base mutant (E477A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306],6BYI_B Crystal structure of the acid-base mutant (E477A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306]
6BYG_A 4.67e-31 26 625 7 672
Crystalstructure of the nucleophile mutant (E575A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306],6BYG_B Crystal structure of the nucleophile mutant (E575A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306]

Swiss-Prot Hits      download full data without filtering help

Created with Snap367311014618322025629333036740344047751355058762366069773648sp|Q4WAH4|MANBB_ASPFU73648sp|B0YBU9|MANBB_ASPFC73648sp|A1CGA8|MANBB_ASPCL73648sp|A1D911|MANBB_NEOFI26652sp|Q0CCA0|MANBB_ASPTN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q4WAH4 6.78e-34 73 648 68 683
Beta-mannosidase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=mndB PE=3 SV=1
B0YBU9 1.20e-33 73 648 68 683
Beta-mannosidase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=mndB PE=3 SV=1
A1CGA8 1.59e-33 73 648 68 683
Beta-mannosidase B OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=mndB PE=3 SV=1
A1D911 8.73e-33 73 648 68 683
Beta-mannosidase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=mndB PE=3 SV=1
Q0CCA0 1.15e-32 26 652 8 685
Beta-mannosidase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=mndB PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001033 0.997213 0.000510 0.000439 0.000379 0.000372

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003883_00398.