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CAZyme Information: MGYG000004082_00053

You are here: Home > Sequence: MGYG000004082_00053

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species AM51-8 sp900761925
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; AM51-8; AM51-8 sp900761925
CAZyme ID MGYG000004082_00053
CAZy Family GH2
CAZyme Description Evolved beta-galactosidase subunit alpha
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1002 MGYG000004082_1|CGC1 114139.79 4.5458
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004082 2757417 MAG United Kingdom Europe
Gene Location Start: 53967;  End: 56975  Strand: -

Full Sequence      Download help

MQYQINKTNY  HTFDIFEVNK  MPPRSYFIPY  PDRKAADQVT  TRERRYASPM  VQCLNGDWDF60
KFYHNPADLP  DVLDTDAVDW  DTIDVPACWQ  FRGYDRPFYV  NLRYQFPYDP  PKIPMEEQVG120
KVFSLMSPEG  GMGPGWAEPK  DEYNFVGVYR  KLVPVEDPSK  EYIISFLGVA  SCMDLYVNGS180
FVGYSEGAHN  TAEFDISSYM  TAGENELVVV  VHRWCNGTYL  ECQDMFRNNG  IFRDVLLRIG240
NKNDVWDLDL  KTEKKADAGD  GEKAVYSAVV  SVEFPEEGEA  SVTICGHGID  QTVQVSSEDH300
IAKAVFEDLP  VMEWTAETPY  LYDLYVETEN  ECIKTRIGFK  KITIDGRLFL  WNGKKVKFHG360
VNHHDTSCTN  GYTMTPEEIE  RDIRTCKEFN  MDTVRTSHYP  PDPYLLEMCD  EMGIYVVDET420
DLETHGVFIH  KLPPSYNRIS  HDPAWEGHYV  DRVKRLYQRD  KLHPSIMMWS  LGNESGGYAN480
TDKMYEYLKE  HTDIPVHYES  AIHCDRKAYD  VGSEMYPPVE  QVHAIGEGTW  KEPKLNDRPY540
FLCEYAHAMG  VGPGGIEGYW  KEIYSYDSLM  GGCIWEMVDH  AVLHEDGSYT  YGGDHGEWEH600
DGNFCVDGLF  YPDRTPSTGA  KLAQFTYRPI  RVSKVGENRF  EIFNTTAFTN  GSRYELKFEW660
SDGRCAVVIP  DTEPLSKSIV  TVEPSDIEDE  SPEVNGDLTA  NRMSWVTVTT  TDRRSGREVS720
KEQILLGAME  CLVEADPELL  EKEEKLPDEV  SLTADGFALK  TDGFTLTSGT  PYTILYRVST780
DNDKTLTGDK  PMEQFEGAKE  EMLHADYKDG  AVTVATKITC  KKSVFTCTDT  YEKTAGGLLV840
TSKIHCEKGK  GHLPRFGKTY  RLDEAFDQVE  YLGRNGESYA  DMKDQTQIER  VLCKVGDMTE900
PNIRPQESGN  RMDTQYAAVS  DGVHRIQFTA  VDRPFELSIK  PYSDVELASM  KHREDEKVSG960
TYVTIEAFQM  GIGTGSCGPA  TTEEFCYDMK  QDYEVKFLIS  WT1002

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap5010015020025030035040045050155160165170175180185190195138886GH2
Family Start End Evalue family coverage
GH2 38 886 2.9e-154 0.9747340425531915

CDD Domains      download full data without filtering help

Created with Snap501001502002503003504004505015516016517017518018519019519978ebgA15985lacZ48881LacZ342630Glyco_hydro_2_C750999Bgal_small_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 0.0 9 978 3 977
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 4.37e-153 15 985 22 1011
beta-galactosidase.
COG3250 LacZ 2.64e-114 48 881 9 799
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 1.21e-83 342 630 1 300
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038 Bgal_small_N 4.57e-38 750 999 17 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits      help

Created with Snap5010015020025030035040045050155160165170175180185190195111000SIP63360.1|GH21999QTE70748.1|GH21999QUC68480.1|GH21999QTE74712.1|GH21999QUA54413.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
SIP63360.1 0.0 1 1000 1 977
QTE70748.1 0.0 1 999 1 978
QUC68480.1 0.0 1 999 1 978
QTE74712.1 0.0 1 999 1 978
QUA54413.1 0.0 1 999 1 978

PDB Hits      download full data without filtering help

Created with Snap50100150200250300350400450501551601651701751801851901951279736S6Z_A279736SD0_A549856ETZ_A549856SEB_A549856ZJP_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 3.64e-127 27 973 21 953
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 3.72e-127 27 973 22 954
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
6ETZ_A 5.22e-106 54 985 39 972
Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB [Arthrobacter sp. 32cB],6H1P_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB - data collected at room temperature [Arthrobacter sp. 32cB]
6SEB_A 7.76e-106 54 985 60 993
Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB in complex with IPTG [Arthrobacter sp. 32cB],6SEC_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cBon complex with ONPG [Arthrobacter sp. 32cB],6SED_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB in complex with galactose [Arthrobacter sp. 32cB]
6ZJP_A 2.06e-105 54 985 60 993
Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB mutant E517Q [Arthrobacter sp. 32cB]

Swiss-Prot Hits      download full data without filtering help

Created with Snap5010015020025030035040045050155160165170175180185190195118997sp|P70753|BGAL_ACTPL7985sp|O33815|BGAL_STAXY27973sp|Q56307|BGAL_THEMA14982sp|O52847|BGAL_PRIM319978sp|P06864|BGA2_ECOLI
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P70753 3.66e-128 18 997 15 995
Beta-galactosidase OS=Actinobacillus pleuropneumoniae OX=715 GN=lacZ PE=3 SV=1
O33815 3.98e-128 7 985 3 978
Beta-galactosidase OS=Staphylococcus xylosus OX=1288 GN=lacZ PE=3 SV=1
Q56307 2.04e-126 27 973 22 954
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 4.05e-118 14 982 25 1013
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
P06864 5.20e-117 19 978 13 977
Evolved beta-galactosidase subunit alpha OS=Escherichia coli (strain K12) OX=83333 GN=ebgA PE=1 SV=4

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000074 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004082_00053.