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CAZyme Information: MGYG000004282_00235

You are here: Home > Sequence: MGYG000004282_00235

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_D sp000434695
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_D; Ruminococcus_D sp000434695
CAZyme ID MGYG000004282_00235
CAZy Family GH2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
914 MGYG000004282_1|CGC2 102087.43 4.7082
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004282 2340138 MAG China Asia
Gene Location Start: 255145;  End: 257889  Strand: -

Full Sequence      Download help

MTDRIDLSGE  WRLALDKKCR  GVLPQFDDTI  TLPGTTSHAG  KGEDNPAREE  GFLTDTKLFE60
GDAWFTRKAD  LSAAVGKTAK  LVFERTRITK  LYIDGEYVGT  QNSLVSPHVY  DITKYVKGGE120
QEITVCVSNV  GYPTKGGHLT  SPDTQTNWNG  ITGEMAVKIY  GAAYADEVKI  YPLFEEKAFR180
VVAKIKGAES  GKAVISAESF  NAPEGKAVHR  PSTVNAIFTG  GELIATLPLG  EDARTWDEYS240
PELYNIKIDI  GGDVYEIIAG  LREFKAVKDK  FYINGRKTFL  RGKHDGMIFP  LTGYAPTTVD300
EWLRVLKISR  SYGMNHYRFH  TCCPPEAAFI  AADMLGIYME  PQLPFWGTIQ  APGEEGFNEE360
EQNFLIAEGF  RMLDAFGSHP  SYCMMSMGNE  LWGSKERLNE  IIGAYKSRDS  RHLYTQGSNN420
FQWFPNVIEN  DDFFVGVRLA  NDRLIRGSYA  MCDAPLGHIQ  IDKPATTHNY  DSIVHPTRAA480
SATEVSEDGT  VQIQYGTTMK  TVKASEADAD  FVPDVPIVTH  EIGQYETYPN  FDEIEKYTGS540
LKARNFEVFR  ERLDEKGLLP  LAHDYFEASG  ALAVQCYKEE  MESIFRSQSL  GGFQVLDIQD600
FSGQGTALVG  VLDAFMDEKG  ICSPEEWREF  CNDAVILAEF  EDYNLESGEG  FAAEIRLTNY660
RPSGVCGKKF  TAVLTCECGT  ELARLSGEVP  KTAENYIALG  RLAAQIPEFE  APKKLTLALA720
VEDTDIRNHY  TLMAYPKRES  VDTAGAYMFE  KLDAEAEKLL  AAGKTVLIVP  QLGDIANSIE780
GYYCQDFWCY  HMFRLISEMM  KKPEPVGTMG  LLIDAQHPAL  ADFPSEKFST  PQWWEIVSNS840
RSEILDGSAE  GKRVIVRTID  NFERNHDLAL  MYEYNYLDGK  VVVCNCDFEK  LAASPEGRQF900
ICSVVGYVKK  CNVR914

Enzyme Prediction      help

No EC number prediction in MGYG000004282_00235.

CAZyme Signature Domains help

Created with Snap45911371822282743193654114575025485946396857317768228683607GH2
Family Start End Evalue family coverage
GH2 3 607 1.1e-53 0.5811170212765957

CDD Domains      download full data without filtering help

Created with Snap45911371822282743193654114575025485946396857317768228681471LacZ7129Glyco_hydro_2_N3285PRK10150
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 6.89e-18 1 471 9 468
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02837 Glyco_hydro_2_N 1.11e-08 7 129 4 135
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK10150 PRK10150 1.86e-06 3 285 11 301
beta-D-glucuronidase; Provisional

CAZyme Hits      help

Created with Snap45911371822282743193654114575025485946396857317768228681909CCO04743.1|GH21907AEE64777.1|GH21909ADU22163.1|GH21909BAV13119.1|GH21909ADL53165.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
CCO04743.1 0.0 1 909 1 904
AEE64777.1 0.0 1 907 1 895
ADU22163.1 0.0 1 909 1 899
BAV13119.1 0.0 1 909 1 914
ADL53165.1 0.0 1 909 1 914

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap459113718222827431936541145750254859463968573177682286876413sp|P77989|BGAL_THEP391474sp|O33815|BGAL_STAXY91413sp|O52847|BGAL_PRIM391390sp|Q04F24|BGAL_OENOB
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P77989 1.41e-10 76 413 72 424
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
O33815 1.27e-08 91 474 142 529
Beta-galactosidase OS=Staphylococcus xylosus OX=1288 GN=lacZ PE=3 SV=1
O52847 6.58e-08 91 413 165 503
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q04F24 6.58e-08 91 390 148 457
Beta-galactosidase OS=Oenococcus oeni (strain ATCC BAA-331 / PSU-1) OX=203123 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000052 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004282_00235.