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CAZyme Information: MGYG000004296_00044

You are here: Home > Sequence: MGYG000004296_00044

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_A faecicola
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Ruminococcus_A; Ruminococcus_A faecicola
CAZyme ID MGYG000004296_00044
CAZy Family GH2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
901 MGYG000004296_1|CGC2 101506.99 4.4706
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004296 2845901 MAG Israel Asia
Gene Location Start: 50031;  End: 52736  Strand: +

Full Sequence      Download help

MEYLSLEEEW  EAQLADGSVY  PMQVPGSLDE  SRIGGKDMGA  NQWHPDADLG  NAENSFDPDA60
PIATRYTRKH  TYEGEAKISR  MISYIPEEEK  RVFLEVERAR  CLKLEIDGKE  IPDYVEPSIS120
TPHIFEVTDV  LDGEHRITLR  SDNSYPGLPH  DAIVFSSAAT  DETQTNWNGL  LGYVRLRTER180
EVFFSAVRVY  PKENTIDVQL  VIDGSIPYKG  ILRVTSPALE  KTEEKEIEIS  AGVHTIALEG240
LKLKENVKKW  DEEEGNLYDL  TASLQDGDEK  SVTFGVRDFG  DDGHGHLALN  GRRIFLRSEA300
NCCEFPETGH  PPMTVGEWDK  ILRLYHSYGV  NCMRFHSHIP  PEAAFTAADQ  MGMLMQPELS360
HWNPKNAFEG  DDSYEYYQRE  LKQTILWLAN  HPSFVMLTFG  NELWTGELGH  QRMDAMVELA420
HSLDTTRMYA  NGSNPHYGTI  GCDAKSDFYT  SQKYYEYDLR  GTFAAMPGDD  GIQGYINNQY480
PSAAVNYDDS  MKHLRETYQK  PVFSFEVGQF  EILPDFGELE  EFHGISDPAN  LRIIQEKAEK540
LGLIDNWNAY  VEATGEISRI  GYREEVEAVM  RTEDMSGISL  LGLQDFPGQG  TALVGMINSH600
MQSKPYDFAK  PERFASFFRA  QLPLAALPKY  TYVSGEILEA  EVRIANYGKT  DMTGPVGYCM660
EGGKVRKCGE  LPAVICPAGG  ITSAGKIEIS  LEDIDEAVRL  DLTVEQDGVK  NQYPVWIYPE720
AKPVCPGKVY  ETKTLDEKAV  QILENGGSVY  LAPDSEKEHL  PSSIQAQFTS  DFWSVGTFAA780
QEGGMGQLID  EKHPIFKNFP  TEFHTNWQWW  PMASQRAVIF  PHPVKAIVTE  MDSYAYMRPM840
AQLAEFRCGG  GKLLFSSMGL  QNLQQYPESR  ALLHAIYQYM  DSEAFAPEEE  ISVEEMSELV900
K901

Enzyme Prediction      help

EC 3.2.1.55

CAZyme Signature Domains help

Created with Snap45901351802252703153604054504955405856306757207658108553484GH2
Family Start End Evalue family coverage
GH2 3 484 3.9e-49 0.5345744680851063

CDD Domains      download full data without filtering help

Created with Snap4590135180225270315360405450495540585630675720765810855245439LacZ245428ebgA245277Glyco_hydro_2285456Glyco_hydro_2_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 3.33e-09 245 439 248 439
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 9.60e-05 245 428 281 471
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam00703 Glyco_hydro_2 9.85e-05 245 277 70 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02836 Glyco_hydro_2_C 2.45e-04 285 456 6 188
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Created with Snap45901351802252703153604054504955405856306757207658108553901QOV18688.1|GH25872QQR31292.1|GH222872ASB42024.1|GH222872ANU54745.1|GH26901QNM03695.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QOV18688.1 0.0 3 901 2 905
QQR31292.1 0.0 5 872 4 865
ASB42024.1 0.0 22 872 1 845
ANU54745.1 0.0 22 872 1 845
QNM03695.1 0.0 6 901 5 948

PDB Hits      download full data without filtering help

Created with Snap45901351802252703153604054504955405856306757207658108551954823GM8_A2274345T98_A1214055T9A_A2454271YQ2_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3GM8_A 3.21e-08 195 482 186 467
ChainA, Glycoside hydrolase family 2, candidate beta-glycosidase [Phocaeicola vulgatus ATCC 8482]
5T98_A 2.87e-07 227 434 238 452
Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis]
5T9A_A 8.64e-07 121 405 132 438
Crystalstructure of BuGH2Cwt [Bacteroides uniformis],5T9A_B Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9A_C Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9A_D Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9G_A Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_B Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_C Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_D Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis]
1YQ2_A 8.06e-06 245 427 281 464
ChainA, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_B Chain B, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_C Chain C, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_D Chain D, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_E Chain E, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_F Chain F, beta-galactosidase [Arthrobacter sp. C2-2]

Swiss-Prot Hits      download full data without filtering help

Created with Snap4590135180225270315360405450495540585630675720765810855248435sp|T2KM09|PLH16_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KM09 6.30e-10 248 435 272 461
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000069 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004296_00044.