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CAZyme Information: MGYG000004296_00148

You are here: Home > Sequence: MGYG000004296_00148

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_A faecicola
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Ruminococcus_A; Ruminococcus_A faecicola
CAZyme ID MGYG000004296_00148
CAZy Family GH2
CAZyme Description Evolved beta-galactosidase subunit alpha
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1041 MGYG000004296_3|CGC1 119895.89 4.8974
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004296 2845901 MAG Israel Asia
Gene Location Start: 46357;  End: 49482  Strand: +

Full Sequence      Download help

MEYVYKHMDW  SNVEVLGRNR  LPVRPFYCGY  PNKESARQGR  REECSNYRLL  NGQWKFAYYE60
SPFYVPDTCM  EKEYDDREFG  MMPVPGHWQL  NGYDYPHYND  AIALFPILDD  PGIQADNPTG120
VYRYTFQEEK  QKDREYILRF  DGVESAYHVW  LNGTFIGYSQ  GPRNTAEFDV  TEALQDGENV180
LAVIVYKFSD  GSYLENQDMW  WFAGIIRDVS  LIRRPKQHMR  DWRIVSDPVM  EQNDPGALQK240
KETTGKICLE  AVFENHTEDE  TALTVEMEVM  DGEQVIFSES  REISGKKGET  EYVTEVILEN300
IKPWSAEQPE  LYRVILTLKK  QGEVLESYGE  WTGFRNICVK  DGLFLVNGEA  IKLKGVNRHD360
WNENTGRCIT  KEDMLADLYL  MKQNNINAVR  TSHYPPHPDF  LDMCDRLGLY  VMEEADLECN420
QMAYTKNMNK  ISDDTIWEKS  YVDRAERMVR  RDKNHPSILF  WSLGNESGFG  SSFVASGRFI480
KEYDPTRLVH  YEEDRDASIA  DVYSTMYTRH  KALEILGRDT  AKKKPHVVCE  YAHAMGNGPG540
GLKEYWEIFE  RYPRLQGGFI  WEWVDHGIKK  YDSNGKAYYT  YGGDYGDYPN  SGAFCCDGLI600
QADRRPTPGI  LQVKKVMEPV  TFIDFDKTTG  EITVCNKYDF  TDLSHLEGTF  KVHTLQGILL660
EGKVDLSEIA  PHGCKRITVY  DSAESGAWCD  EQDIWLTIAV  CYKEKQIWSE  EAHHEVAFHQ720
ECLNKAVRKT  VKEPADNRSS  GELHMVEKAG  IIYVEGQNFT  AEFDRVHGYL  SGYTLNGERL780
ICKGLGLNFW  RAPVDNDKNV  AEIWEKAMVK  VMTNLVEKVT  VEEKEQEVVI  SVSQIYAPIT840
VDWKIIVKAE  YHIQADGLIT  MSYHGVPTGV  QLPESFPRIG  MRFVLDKACE  QAVWYGRGPL900
ETYPDCKEGN  AIGCWEKKVE  DFYFPYVLPQ  ETGNHEDTRW  AAFVTEAGNG  ICIASDKEFS960
FGALHYTQEN  LTQATHTNEL  HRTENIQLSV  DYAQHGLGSA  SWGAECLEKD  KLYPEPFTFT1020
WKIFGTGKES  LAERAEQYRR  K1041

Enzyme Prediction      help

No EC number prediction in MGYG000004296_00148.

CAZyme Signature Domains help

Created with Snap5210415620826031236441646852057262467672878083288493698837911GH2
Family Start End Evalue family coverage
GH2 37 911 1.2e-207 0.9720744680851063

CDD Domains      download full data without filtering help

Created with Snap5210415620826031236441646852057262467672878083288493698891002lacZ101027ebgA50905LacZ339622Glyco_hydro_2_C7551023Bgal_small_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 0.0 9 1002 16 1003
beta-galactosidase.
PRK10340 ebgA 0.0 10 1027 4 1003
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 4.59e-164 50 905 15 799
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 7.17e-113 339 622 3 302
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038 Bgal_small_N 4.02e-88 755 1023 1 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits      help

Created with Snap5210415620826031236441646852057262467672878083288493698811041QJU16899.1|GH211041ANU77414.1|GH211041QQQ95001.1|GH211041ASU30213.1|GH211041QIB56341.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QJU16899.1 0.0 1 1041 1 1060
ANU77414.1 0.0 1 1041 1 1060
QQQ95001.1 0.0 1 1041 1 1060
ASU30213.1 0.0 1 1041 1 1060
QIB56341.1 0.0 1 1041 1 1042

PDB Hits      download full data without filtering help

Created with Snap52104156208260312364416468520572624676728780832884936988910236S6Z_A910236SD0_A410023DYO_A410021JZ7_A410023MUY_1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 1.50e-197 9 1023 3 979
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 1.54e-197 9 1023 4 980
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DYO_A 4.60e-180 4 1002 10 999
ChainA, Beta-galactosidase [Escherichia coli K-12],3DYO_B Chain B, Beta-galactosidase [Escherichia coli K-12],3DYO_C Chain C, Beta-galactosidase [Escherichia coli K-12],3DYO_D Chain D, Beta-galactosidase [Escherichia coli K-12],3DYP_A Chain A, Beta-galactosidase [Escherichia coli K-12],3DYP_B Chain B, Beta-galactosidase [Escherichia coli K-12],3DYP_C Chain C, Beta-galactosidase [Escherichia coli K-12],3DYP_D Chain D, Beta-galactosidase [Escherichia coli K-12]
1JZ7_A 1.28e-179 4 1002 10 999
E.COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_B E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_C E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_D E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],4TTG_A Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_B Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_C Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_D Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli]
3MUY_1 1.28e-179 4 1002 10 999
Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Created with Snap52104156208260312364416468520572624676728780832884936988101038sp|P06864|BGA2_ECOLI91023sp|Q56307|BGAL_THEMA91013sp|O52847|BGAL_PRIM341002sp|B7N8Q1|BGAL_ECOLU91002sp|Q6D736|BGAL_PECAS
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P06864 4.39e-233 10 1038 4 1013
Evolved beta-galactosidase subunit alpha OS=Escherichia coli (strain K12) OX=83333 GN=ebgA PE=1 SV=4
Q56307 8.43e-197 9 1023 4 980
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 1.16e-192 9 1013 19 1020
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
B7N8Q1 4.36e-181 4 1002 11 1000
Beta-galactosidase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) OX=585056 GN=lacZ PE=3 SV=1
Q6D736 9.49e-181 9 1002 24 1016
Beta-galactosidase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000062 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004296_00148.