logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000012_00487

You are here: Home > Sequence: MGYG000000012_00487

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacillus subtilis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis
CAZyme ID MGYG000000012_00487
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1643 176163.71 10.1893
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000012 4053580 Isolate United Kingdom Europe
Gene Location Start: 442105;  End: 447036  Strand: +

Full Sequence      Download help

MAKLTARFDL  EDRVSKKLRK  IQNGFRALEK  YRKMTQRNRA  IDIRKESKTV  LRTIDRIQKS60
LKKKLGAQMI  SISAEDNASI  VIQKVQTQLQ  GLPASVSIKI  GASDQATEKF  ERLRELVAGF120
KGFTIMLSAE  DQISPAVQKI  QRYMENALQN  GYSVTIRVID  HVMKTVGRIS  AGIDALTGKD180
NKLELAINDK  VSDKLDSLQK  RIDSMGSSGS  PDKAASSAGG  NAGDIASMFD  PETILTALDK240
FAASFMEKVD  EIATKFSPET  ILTELDKFTT  SFMNKVDEIA  TKFSPETILT  ELDKFTTSFM300
SKVDAIATKF  SPETILTQLD  KFTTSFMSRV  DAIATKFSPE  TILAQLDKFT  TSFMSKVDAI360
ATKFSPETIL  AQLDKFTTSF  MSKVDAIATK  FSPETILSQL  DKFTTSFMGK  VDAIATKFSP420
ETILKQLDKF  TGSFMKKVDE  IASKFSPEAI  FKQLDKFTGS  FMKKVDEVAS  KFSPEAIFKQ480
LDKFTDSFMK  KVDDIVSKFS  PETIFNELDK  FTDSFMKKVD  DVVSKFSPET  IFNELDKFTD540
SFMKKVDDVV  SKFSPDAIIN  KAEDFVTNIV  DKISEKFNFL  NPDKIANKAE  KFFDNIVSKI600
AKKFEKFSPD  KIIEKVGEFF  EKIIKGIAEK  LGNLDFGGLL  GGKSSGSKGK  QKASKANTNN660
STSSNSNRTK  KPSMNQKASG  SKSKKSGGKW  GGACGCCCAG  ISTGKSKKVK  NRNGSSNKGN720
KSNPVSTPKS  AKAAKGGSGK  GFSGLLKTLG  ESKGLKGGLK  GLKGAAKGIP  GLGEILSLTD780
LAGINKDNAG  EKVGSAGGGL  AGAAAGAAIG  SVVPGVGTAI  GGVVGGIAGT  FGGESLGKAI840
DAGALEDTWN  SITEGAQNAW  SAIQDTWGTV  STWFMDNVWT  PVSTAVVGVA  TSIWSNIVNA900
WTTIQTIFST  VSTWFMDNVW  TPVSSAVVGV  ATAIWSKIVN  AWTTIKNVFS  TVASWFMSNV960
WGPVKSAVIG  AATTIWDKMT  GAWNKIKSVF  STVSGWFMDT  VWNPVKNTVS  DVGKGISDAF1020
KKAIDTVKNI  WKGLSGWFKK  NIQEPLTKVG  EAISDAFSKA  FGWVKQIWDK  AGGVASKVIN1080
FVTGDGDPNK  GKDPDKKATG  GYITKPTISW  IGEAGKEFVI  PVDNNRGRGK  MLLSQAASKL1140
GMQVVDDMGA  ASSSGGSPVS  VSGGAAASPL  SGSASPAMDT  ANLTGQASTL  GQQFSEGFDK1200
GISNQPVKME  DWKKKNINTP  FTQMISASPN  YGKQMVSGYA  KGQNGTATGT  DGFLQSKVKT1260
PYQATVNKSS  SWGTGTVKGF  TQGQNSTQTG  TAQYVSTHVD  KPFLRSKDTS  NSWGSGLIGN1320
FVTGMNAKSS  EVKQAAKDMA  KRVEQAFREE  LDIHSPSRVM  MSLGRFASIG  VVKGLGSVDV1380
KKYAEKQAGS  LAAAYSGMGT  MSGDVKQWIM  AALMATKTPI  SWLPGLMTIA  QHESGGNPNA1440
INLWDSNAKA  GHPSQGLMQT  IPSTFNDHKA  PGMGNIKNPI  HNAAAAIGYI  KSRYGSIDNV1500
PGIRSMKHGG  PYVGYANGGL  ITKEQIARVG  EGNKREWIIP  EERGIRGRYL  LQRAAQALGM1560
EVTDPSQSQQ  SELSSGQVSA  VTSGSRQTIQ  TAGTKEIKIE  FNGDQHFHND  QDADSLVAKI1620
KQALLDELQK  DINTGTKGVV  AFD1643

Enzyme Prediction      help

No EC number prediction in MGYG000000012_00487.

CDD Domains      download full data without filtering help

Created with Snap82164246328410492575657739821903985106711501232131413961478156014091640SLT14231546LT_TF-like14121537SLT8511067COG541214261491LT-like
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3953 SLT 2.36e-95 1409 1640 1 235
SLT domain protein [Mobilome: prophages, transposons].
cd13402 LT_TF-like 2.83e-55 1423 1546 1 117
lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.
pfam01464 SLT 3.81e-20 1412 1537 1 114
Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
COG5412 COG5412 3.76e-09 851 1067 211 464
Phage-related protein [Mobilome: prophages, transposons].
cd00254 LT-like 6.19e-05 1426 1491 4 61
lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.

CAZyme Hits      help

Created with Snap82164246328410492575657739821903985106711501232131413961478156011643QRZ94261.1|GH2311643AFI27925.1|GH2311643AUZ26057.1|GH2311643QGM17484.1|GH2311643ADM37347.1|GH23
Hit ID E-Value Query Start Query End Hit Start Hit End
QRZ94261.1 0.0 1 1643 1 1724
AFI27925.1 0.0 1 1643 1 1724
AUZ26057.1 0.0 1 1643 1 1562
QGM17484.1 0.0 1 1643 1 1613
ADM37347.1 0.0 1 1643 1 1669

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap82164246328410492575657739821903985106711501232131413961478156010951643sp|P54334|XKDO_BACSU10701643sp|P45931|YQBO_BACSU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P54334 3.72e-250 1095 1643 784 1332
Phage-like element PBSX protein XkdO OS=Bacillus subtilis (strain 168) OX=224308 GN=xkdO PE=4 SV=2
P45931 7.86e-208 1070 1643 1016 1585
Uncharacterized protein YqbO OS=Bacillus subtilis (strain 168) OX=224308 GN=yqbO PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000046 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000012_00487.