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CAZyme Information: MGYG000001210_00008

You are here: Home > Sequence: MGYG000001210_00008

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Mediterraneibacter sp900553885
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter; Mediterraneibacter sp900553885
CAZyme ID MGYG000001210_00008
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
590 MGYG000001210_1|CGC1 63461.54 6.3816
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001210 2584596 MAG Austria Europe
Gene Location Start: 5990;  End: 7762  Strand: -

Full Sequence      Download help

MADIKTRDVD  RSMKFKDAAA  SLPKELVRDL  ALKTGDAFRP  GSSASGFEPE  SMSEDAGNRM60
ERGMEWTADH  GARSAWSTGK  KAAGTAVRKW  KGGDQENFSE  TETSSAGKTY  AEGKENRPSA120
AEKRETLKKQ  GSSAEPSPEN  GKDPRTLKTR  ERIEDGKKEL  ERSGRTLKDT  GKELKTAGKA180
ARQTGYANGA  VQEAAIAKEQ  SKRAYQAGKQ  LAMQGKQTVK  AGARGAKKVF  QGAKTAVRTA240
VTAVRSVIGL  VSAGAVVVFL  VIILGVVGGI  AGASGSSSSE  ALSQEVLAYT  ATIQRYASEF300
GIPEYVASIQ  AIMMQESGGR  GTDPMQSSEC  PYNTEYPNTP  GGITDPDYSI  RVGIQYYADC360
VTQAGCESPA  DISRLQLSWQ  GYNYGNGYIG  WALTNYGGYS  LENALEFSQQ  QAAAHGWSGY420
GDPEYVPHVQ  RYYSGGNLFA  GLFGDQQIVT  VAKGEIGASD  GQKYWSWYGF  SSYQEWCACF480
VSWCGEQAGL  IESGAMPRFS  LCSDGMSWFQ  SQGKWQAAGS  TPTAGSLVFF  DWGGDGVPDH540
VAIVERCENG  IVYTVEGNTS  TRVNGESMRG  VWQHQYNIKE  TAILGYGVQM  590

Enzyme Prediction      help

No EC number prediction in MGYG000001210_00008.

CDD Domains      download full data without filtering help

Created with Snap295988118147177206236265295324354383413442472501531560289434CwlT-like284433Lysozyme_like468558CHAP3236PTZ0012172234PTZ00121
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd16891 CwlT-like 1.35e-52 289 434 1 151
CwlT-like N-terminal lysozyme domain and similar domains. CwlT is a bifunctional cell wall hydrolase containing an N-terminal lysozyme domain and a C-terminal NlpC/P60 endopeptidase domain (gamma-d-D-glutamyl-L-diamino acid endopeptidase), and has been implicated in the spread of transposons. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
pfam13702 Lysozyme_like 1.29e-51 284 433 2 165
Lysozyme-like.
pfam05257 CHAP 1.59e-16 468 558 1 83
CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.
PTZ00121 PTZ00121 1.42e-05 3 236 1253 1485
MAEBL; Provisional
PTZ00121 PTZ00121 7.65e-04 72 234 1341 1496
MAEBL; Provisional

CAZyme Hits      help

Created with Snap295988118147177206236265295324354383413442472501531560252588QYX27925.1|GH231588QMW78500.1|GH231588QIB53982.1|GH23250588QIB55652.1|GH23250588QMW76485.1|GH23
Hit ID E-Value Query Start Query End Hit Start Hit End
QYX27925.1 2.68e-161 252 588 238 566
QMW78500.1 2.68e-161 1 588 1 566
QIB53982.1 2.68e-161 1 588 1 566
QIB55652.1 4.69e-158 250 588 274 604
QMW76485.1 4.69e-158 250 588 274 604

PDB Hits      download full data without filtering help

Created with Snap2959881181471772062362652953243543834134424725015315602824324FDY_A2825304HPE_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4FDY_A 3.45e-13 282 432 22 177
ChainA, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50],4FDY_B Chain B, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50]
4HPE_A 4.40e-13 282 530 20 257
ChainA, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_B Chain B, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_C Chain C, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_D Chain D, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_E Chain E, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_F Chain F, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630]

Swiss-Prot Hits      download full data without filtering help

Created with Snap295988118147177206236265295324354383413442472501531560282530sp|P96645|YDDH_BACSU289411sp|O34636|YOCA_BACSU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P96645 6.07e-29 282 530 53 279
Probable endopeptidase YddH OS=Bacillus subtilis (strain 168) OX=224308 GN=yddH PE=3 SV=1
O34636 8.71e-09 289 411 55 168
Uncharacterized membrane protein YocA OS=Bacillus subtilis (strain 168) OX=224308 GN=yocA PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000051 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

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