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CAZyme Information: MGYG000003288_00796

You are here: Home > Sequence: MGYG000003288_00796

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Duodenibacillus sp900544255
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Duodenibacillus; Duodenibacillus sp900544255
CAZyme ID MGYG000003288_00796
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
552 MGYG000003288_43|CGC2 61685.77 10.4381
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003288 2215926 MAG Mongolia Asia
Gene Location Start: 26919;  End: 28577  Strand: +

Full Sequence      Download help

MALSFRRYRA  PSMRPFSLLP  LLAVALASFA  VPAQSVRTFE  GTDLYADVPP  MTPAQAFAAP60
VIEKALPASE  PPENEVRASD  DQPATERSNT  ASDDASADIW  DRIRRGFALP  PLKTVRGRNA120
LKQYARHPDY  FRRVSDRAGK  YLYHIVEEVE  ARGMPTELAL  LPFVESAFQP  EALSYAKASG180
LWQFMPSTGT  IFSLQQNFWK  DERRDVLEST  RAALDYLARL  HDRFGDWQLA  LAAYNWGEGS240
VTRAIRRAQA  RGRATDYNHL  KMPRETAWYV  PKLMAVKEIV  EHPEKYGVTL  PEIENAPYFV300
KVTKSRDIDV  QTAALLAEMD  PDEFKQLNPG  FNLPVIVASH  NSSFLLPIDR  VGLFMNNLAR360
WVETGKPLSS  WMLYRVAVGE  SLADIAGKTG  MTEADLRRIN  RIPAGRKVLA  GSSLLVDAGD420
ADAPAILEED  AAAGVKLAAP  EVRRVVYRVR  RGDTIYEIAK  RFGVTQRSLR  KTNHLRSNQL480
RIGQRLIVVV  APGTKSRALP  TRTVDGARIY  QVKKGDTFAS  IARRFKTSVS  RLKQANGLKT540
NQLKIGQRLV  IR552

Enzyme Prediction      help

No EC number prediction in MGYG000003288_00796.

CAZyme Signature Domains help

Created with Snap275582110138165193220248276303331358386414441469496524141282GH23
Family Start End Evalue family coverage
GH23 141 282 7.6e-25 0.9185185185185185

CDD Domains      download full data without filtering help

Created with Snap27558211013816519322024827630333135838641444146949652498549mltD149278MltD-like154256SLT164275LT-like364552PRK06347
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10783 mltD 1.11e-94 98 549 61 444
membrane-bound lytic murein transglycosylase D; Provisional
cd16894 MltD-like 7.46e-63 149 278 1 129
Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
pfam01464 SLT 3.66e-25 154 256 11 114
Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
cd00254 LT-like 3.69e-18 164 275 10 108
lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.
PRK06347 PRK06347 1.26e-16 364 552 394 592
1,4-beta-N-acetylmuramoylhydrolase.

CAZyme Hits      help

Created with Snap27558211013816519322024827630333135838641444146949652475551BBF22593.1|CBM50|GH2397551QQS89247.1|CBM50|GH2381551QDA55156.1|CBM50|GH2391551ANU65188.1|CBM50|GH2391551QQQ96345.1|CBM50|GH23
Hit ID E-Value Query Start Query End Hit Start Hit End
BBF22593.1 1.37e-167 75 551 24 504
QQS89247.1 6.09e-164 97 551 66 526
QDA55156.1 2.36e-163 81 551 42 520
ANU65188.1 7.65e-157 91 551 36 506
QQQ96345.1 7.65e-157 91 551 36 506

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap27558211013816519322024827630333135838641444146949652498490sp|P0AEZ8|MLTD_ECOL698490sp|P0AEZ7|MLTD_ECOLI135297sp|P32820|TBTA_ALTSM447552sp|P54421|LYTE_BACSU374551sp|O07532|LYTF_BACSU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0AEZ8 5.80e-63 98 490 58 444
Membrane-bound lytic murein transglycosylase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mltD PE=3 SV=1
P0AEZ7 5.80e-63 98 490 58 444
Membrane-bound lytic murein transglycosylase D OS=Escherichia coli (strain K12) OX=83333 GN=mltD PE=1 SV=1
P32820 1.90e-29 135 297 19 178
Putative tributyltin chloride resistance protein OS=Alteromonas sp. (strain M-1) OX=29457 GN=tbtA PE=3 SV=1
P54421 5.09e-11 447 552 88 193
Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1
O07532 1.76e-10 374 551 176 350
Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.003391 0.994827 0.001131 0.000240 0.000201 0.000191

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003288_00796.